Related papers: Interpretable Deep Learning in Drug Discovery
Neural networks are often described as black boxes, reflecting the significant challenge of understanding their internal workings and interactions. We propose a different perspective that challenges the prevailing view: rather than being…
Providing textual concept-based explanations for neurons in deep neural networks (DNNs) is of importance in understanding how a DNN model works. Prior works have associated concepts with neurons based on examples of concepts or a…
This paper claims that machine learning models deployed in high stakes domains such as medicine must be interpretable, shareable, reproducible and accountable. We argue that these principles should form the foundational design criteria for…
There is a growing concern about typically opaque decision-making with high-performance machine learning algorithms. Providing an explanation of the reasoning process in domain-specific terms can be crucial for adoption in risk-sensitive…
The success of neural networks builds to a large extent on their ability to create internal knowledge representations from real-world high-dimensional data, such as images, sound, or text. Approaches to extract and present these…
Nowadays, neural network (NN) and deep learning (DL) techniques are widely adopted in many applications, including recommender systems. Given the sparse and stochastic nature of collaborative filtering (CF) data, recent works have…
Machine learning technologies for protein function prediction are black box models. Despite their potential to identify key drug targets with high accuracy and accelerate therapy development, the adoption of these methods depends on…
In spite of several claims stating that some models are more interpretable than others -- e.g., "linear models are more interpretable than deep neural networks" -- we still lack a principled notion of interpretability to formally compare…
Although deep convolutional networks have achieved improved performance in many natural language tasks, they have been treated as black boxes because they are difficult to interpret. Especially, little is known about how they represent…
Many text classification applications require models with satisfying performance as well as good interpretability. Traditional machine learning methods are easy to interpret but have low accuracies. The development of deep learning models…
A proof-of-concept framework for identifying molecules of unknown elemental composition and structure using experimental rotational data and probabilistic deep learning is presented. Using a minimal set of input data determined…
Empirical evidence shows that deep vision networks often represent concepts as directions in latent space with concept information written along directional components in the vector representation of the input. However, the mechanism to…
In an attempt to gather a deeper understanding of how convolutional neural networks (CNNs) reason about human-understandable concepts, we present a method to infer labeled concept data from hidden layer activations and interpret the…
The advancement of robots, particularly those functioning in complex human-centric environments, relies on control solutions that are driven by machine learning. Understanding how learning-based controllers make decisions is crucial since…
(Artificial) neural networks have become increasingly popular in mechanics to accelerate computations with model order reduction techniques and as universal models for a wide variety of materials. However, the major disadvantage of neural…
Although neural networks have seen tremendous success as predictive models in a variety of domains, they can be overly confident in their predictions on out-of-distribution (OOD) data. To be viable for safety-critical applications, like…
Automatic depression detection on Twitter can help individuals privately and conveniently understand their mental health status in the early stages before seeing mental health professionals. Most existing black-box-like deep learning…
Deep neural networks achieve state of the art performance but remain difficult to interpret mechanistically. In this work, we propose a control theoretic framework that treats a trained neural network as a nonlinear state space system and…
Deep reinforcement learning (RL) has shown remarkable success in complex domains, however, the inherent black box nature of deep neural network policies raises significant challenges in understanding and trusting the decision-making…
Predicting whether a molecule can cross the blood-brain barrier (BBB) is a key step in early-stage neuro-pharmaceutical design, directly influencing the efficiency and success rate of drug development. Traditional methods based on…