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While pathology foundation models have transformed cancer image analysis, they often lack integration with molecular data at single-cell resolution, limiting their utility for precision oncology. Here, we present PAST, a pan-cancer…

Quantitative Methods · Quantitative Biology 2025-07-10 Changchun Yang , Haoyang Li , Yushuai Wu , Yilan Zhang , Yifeng Jiao , Yu Zhang , Rihan Huang , Yuan Cheng , Yuan Qi , Xin Guo , Xin Gao

Rapid growth in the development of medical imaging analysis technology has been propelled by the great interest in improving computer-aided diagnosis and detection (CAD) systems for three popular image visualization tasks: classification,…

Computer Vision and Pattern Recognition · Computer Science 2022-03-03 Manu Goyal , Moi Hoon Yap , Saeed Hassanpour

Quantitative ultrasound, e.g., speed-of-sound (SoS) in tissues, provides information about tissue properties that have diagnostic value. Recent studies showed the possibility of extracting SoS information from pulse-echo ultrasound raw data…

Image and Video Processing · Electrical Eng. & Systems 2022-07-07 Farnaz Khun Jush , Markus Biele , Peter M. Dueppenbecker , Andreas Maier

Radio tomographic imaging (RTI) has recently been proposed for tracking object location via radio waves without requiring the objects to transmit or receive radio signals. The position is extracted by inferring which voxels are obstructing…

Networking and Internet Architecture · Computer Science 2017-01-04 Christopher R. Anderson , Richard K. Martin , T. Owens Walker , Ryan W. Thomas

Skin cancer is one of the most prevalent and preventable types of cancer, yet its early detection remains a challenge, particularly in resource-limited settings where access to specialized healthcare is scarce. This study proposes an…

Microbiome data analysis is essential for understanding host health and disease, yet its inherent sparsity and noise pose major challenges for accurate imputation, hindering downstream tasks such as biomarker discovery. Existing imputation…

Machine Learning · Computer Science 2025-08-01 Rabeya Tus Sadia , Qiang Cheng

Current self-supervised denoising techniques achieve impressive results, yet their real-world application is frequently constrained by substantial computational and memory demands, necessitating a compromise between inference speed and…

Computer Vision and Pattern Recognition · Computer Science 2025-10-20 Tomáš Chobola , Julia A. Schnabel , Tingying Peng

Cardiac T1 mapping provides critical quantitative insights into myocardial tissue composition, enabling the assessment of pathologies such as fibrosis, inflammation, and edema. However, the inherently dynamic nature of the heart imposes…

Image and Video Processing · Electrical Eng. & Systems 2025-12-09 Tamir Shor , Moti Freiman , Chaim Baskin , Alex Bronstein

Plasma impedance probes (PIPs) are a type of RF probe that primarily measure electron density. This work introduces two advancements: a streamlined analytical model for interpreting PIP-monopole measurements and techniques for achieving…

Plasma Physics · Physics 2023-07-27 John W. Brooks , Erik M. Tejero , Matthew C. Paliwoda , Michael S. McDonald

Masked Image Modelling (MIM) has been shown to be an efficient self-supervised learning (SSL) pre-training paradigm when paired with transformer architectures and in the presence of a large amount of unlabelled natural images. The…

Computer Vision and Pattern Recognition · Computer Science 2023-01-02 Alvaro Fernandez-Quilez , Christoffer Gabrielsen Andersen , Trygve Eftestøl , Svein Reidar Kjosavik , Ketil Oppedal

The vehicular-to-everything (V2X) technology has recently drawn a number of attentions from both academic and industrial areas. However, the openness of the wireless communication system makes it more vulnerable to identity impersonation…

Signal Processing · Electrical Eng. & Systems 2023-01-05 Tianshu Chen , Hong Shen , Aiqun Hu , Weihang He , Jie Xu , Hongxing Hu

Delineation of cancerous regions in gigapixel whole slide images (WSIs) is a crucial diagnostic procedure in digital pathology. This process is time-consuming because of the large search space in the gigapixel WSIs, causing chances of…

Image and Video Processing · Electrical Eng. & Systems 2020-07-21 Hsien-Tzu Cheng , Chun-Fu Yeh , Po-Chen Kuo , Andy Wei , Keng-Chi Liu , Mong-Chi Ko , Kuan-Hua Chao , Yu-Ching Peng , Tyng-Luh Liu

Magnetic Resonance Fingerprinting (MRF) enables the simultaneous quantification of multiple properties of biological tissues. It relies on a pseudo-random acquisition and the matching of acquired signal evolutions to a precomputed…

Text-to-Image (T2I) diffusion models are widely recognized for their ability to generate high-quality and diverse images based on text prompts. However, despite recent advances, these models are still prone to generating unsafe images…

Computer Vision and Pattern Recognition · Computer Science 2024-12-06 Jiangweizhi Peng , Zhiwei Tang , Gaowen Liu , Charles Fleming , Mingyi Hong

The Topological Signal Processing (TSP) framework has been recently developed to analyze signals defined over simplicial complexes, i.e. topological spaces represented by finite sets of elements that are closed under inclusion of subsets…

Signal Processing · Electrical Eng. & Systems 2021-12-14 Stefania Sardellitti , Sergio Barbarossa , Lucia Testa

State of health (SOH) estimation for lithium-ion battery modules with cells connected in parallel is a challenging problem, especially with cell-to-cell variations. Incremental capacity analysis (ICA) and differential voltage analysis (DVA)…

Systems and Control · Electrical Eng. & Systems 2024-05-21 Qinan Zhou , Dyche Anderson , Jing Sun

Absolute quantity imaging of biomolecules on a single cell level is critical for measurement assurance in biosciences and bioindustries. While infrared (IR) transmission microscopy is a powerful label-free imaging modality capable of…

Quantitative Methods · Quantitative Biology 2024-03-29 Yow-Ren Chang , Seong-Min Kim , Young Jong Lee

Deep, high-resolution imaging is essential for unraveling biological complexity and advancing medical diagnostics, yet scattering fundamentally limits optical methods. Among the most promising approaches, photoacoustic imaging achieves…

Shape measures have emerged as promising descriptors of white matter tractography, offering complementary insights into anatomical variability and associations with cognitive and clinical phenotypes. However, conventional methods for…

Image and Video Processing · Electrical Eng. & Systems 2025-10-22 Yui Lo , Yuqian Chen , Dongnan Liu , Leo Zekelman , Jarrett Rushmore , Yogesh Rathi , Nikos Makris , Alexandra J. Golby , Fan Zhang , Weidong Cai , Lauren J. O'Donnell

Satellite-derived measurements are negatively impacted by cloud cover and surface reflectivity. These biases must be discarded and significantly increase the amount of missing data within remote sensing images. This paper expands the…

Atmospheric and Oceanic Physics · Physics 2022-04-13 Yannic Lops , Masoud Ghahremanloo , Arman Pouyaei , Yunsoo Choi , Jia Jung , Seyedali Mousavinezhad , Ahmed Khan Salman , Davyda Hammond