Related papers: Tree decomposition of Reeb graphs, parametrized co…
In this paper, a new information theoretic framework for graph matching is introduced. Using this framework, the graph isomorphism and seeded graph matching problems are studied. The maximum degree algorithm for graph isomorphism is…
One of the prevailing ideas in geometric and topological data analysis is to provide descriptors that encode useful information about hidden objects from observed data. The Reeb graph is one such descriptor for a given scalar function. The…
This paper proves the reconstruction conjecture for graphs which are isomorphic to the cube of a tree. The proof uses the reconstructibility of trees from their peripheral vertex deleted subgraphs. The main result follows from (i)…
The subject of pattern avoiding permutations has its roots in computer science, namely in the problem of sorting a permutation through a stack. A formula for the number of permutations of length n that can be sorted by passing it twice…
Considering systems of separations in a graph that separate every pair of a given set of vertex sets that are themselves not separated by these separations, we determine conditions under which such a separation system contains a nested…
Many algorithms have been developed for NP-hard problems on graphs with small treewidth $k$. For example, all problems that are expressable in linear extended monadic second order can be solved in linear time on graphs of bounded treewidth.…
One of the most animated themes of multidimensional persistence is the comparison between invariants. The matching distance between persistent Betti numbers functions (or rank invariants), is among the most studied metrics in this context,…
The maximum common subtree isomorphism problem asks for the largest possible isomorphism between subtrees of two given input trees. This problem is a natural restriction of the maximum common subgraph problem, which is ${\sf NP}$-hard in…
The canonical tree-decomposition theorem, given by Robertson and Seymour in their seminal graph minors series, turns out to be one of the most important tool in structural and algorithmic graph theory. In this paper, we provide the…
In this paper we discuss reconstruction problems for graphs. We develop some new ideas like isomorphic extension of isomorphic graphs, partitioning of vertex sets into sets of equivalent points, subdeck property, etc. and develop an…
The interleaving distance is arguably the most prominent distance measure in topological data analysis. In this paper, we provide bounds on the computational complexity of determining the interleaving distance in several settings. We show…
Pedigrees, or family trees, are graphs of family relationships that are used to study inheritance. A fundamental problem in computational biology is to find, for a pedigree with $n$ individuals genotyped at every site, a set of…
Discovering the underlying structures present in large real world graphs is a fundamental scientific problem. In this paper we show that a graph's clique tree can be used to extract a hyperedge replacement grammar. If we store an ordering…
Let $T$ be a tree with $t$ edges. We show that the number of isomorphic (labeled) copies of $T$ in a graph $G = (V,E)$ of minimum degree at least $t$ is at least \[2|E| \prod_{v \in V} (d(v) - t + 1)^{\frac{(t-1)d(v)}{2|E|}}.\]…
In Chapter 1 we fully characterise pairs of finite graphs which form a gap in the full homomorphism order. This leads to a simple proof of the existence of generalised duality pairs. We also discuss how such results can be carried to…
The Reeb space is a fundamental data structure in computational topology that represents the fiber topology of a multi-field (or multiple scalar fields), extending the level set topology of a scalar field. Efficient algorithms have been…
We introduces the umodules, a generalisation of the notion of graph module. The theory we develop captures among others undirected graphs, tournaments, digraphs, and $2-$structures. We show that, under some axioms, a unique decomposition…
This paper studies graphs that have two tree decompositions with the property that every bag from the first decomposition has a bounded-size intersection with every bag from the second decomposition. We show that every graph in each of the…
In this paper, we present fixed-parameter tractability algorithms for both the undirected and directed versions of the Spanning Tree Isomorphism Problem, parameterized by the size $k$ of a redundant set. A redundant set is a collection of…
We adapt the classical 3-decomposition of any 2-connected graph to the case of simple graphs (no loops or multiple edges). By analogy with the block-cutpoint tree of a connected graph, we deduce from this decomposition a bicolored tree…