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Previous evolutionary studies demonstrated how evaluating evolving agents in variable environmental conditions enable them to develop solutions that are robust to environmental variation. We demonstrate how the robustness of the agents can…

Neural and Evolutionary Computing · Computer Science 2018-03-05 Nicola Milano , Jônata Tyska Carvalho , Stefano Nolfi

Phase separation has emerged as an essential concept for the spatial organization inside biological cells. However, despite the clear relevance to virtually all physiological functions, we understand surprisingly little about what phases…

Biological Physics · Physics 2022-08-10 David Zwicker , Liedewij Laan

Gene gains and losses have shaped the gene repertoire of species since the universal last common ancestor to species today. Genes in extant species were gained at different historical times via de novo creation of new genes, duplication of…

Populations and Evolution · Quantitative Biology 2018-02-19 Haiming Tang , Paul Thomas , Haoran Xia

Metabolism displays striking and robust regularities in the forms of modularity and hierarchy, whose composition may be compactly described. This renders metabolic architecture comprehensible as a system, and suggests the order in which…

Molecular Networks · Quantitative Biology 2015-06-05 Rogier Braakman , Eric Smith

The product of resting heart rate and maximum lifespan is approximately constant across adult warm-blooded vertebrates, $N^\star = f_H L \approx 10^9$ cardiac cycles, a regularity documented since Rubner (1908) but lacking a thermodynamic…

Biological Physics · Physics 2026-03-31 Mesfin Taye

The adaptation of biological species to their environment depends on their traits. When various biological processes occur (survival, reproduction, migration, etc.), the trait distribution may change with respect to time and space. In the…

Analysis of PDEs · Mathematics 2021-05-07 Léonard Dekens , Florian Lavigne

Due to recent advances in synthetic biology and artificial life, the origin of life is currently a hot topic of research. We review the literature and argue that the two traditionally competing "replicator-first" and "metabolism-first"…

Artificial Intelligence · Computer Science 2013-11-21 Tom Froese , Nathaniel Virgo , Takashi Ikegami

Sperm are propelled by bending waves travelling along the flagellum. During steering in gradients of sensory cues, sperm adjust the flagellar beat waveform. Symmetric and asymmetric beat waveforms produce straight and curved swimming paths,…

Immediately after their formation, the terrestrial planets experienced intense impact bombardment by comets, leftover planetesimals from primary accretion, and asteroids. This temporal interval in solar system evolution, termed late…

Earth and Planetary Astrophysics · Physics 2019-08-30 Stephen J. Mojzsis , Ramon Brasser , Nigel M. Kelly , Oleg Abramov , Stephanie C. Werner

Data describing the growth of the world population in the past 12,000 years are analysed. It is shown that, if unchecked, population does not increase exponentially but hyperbolically. This analysis reveals three approximately-determined…

Populations and Evolution · Quantitative Biology 2016-01-21 Ron W. Nielsen

Transposed elements (TEs) are mobile genetic sequences. During the evolution of eukaryotes TEs were inserted into active protein-coding genes, affecting gene structure, expression and splicing patterns, and protein sequences. Genomic…

Genomics · Quantitative Biology 2008-11-24 Asaf Levy , Noa Sela , Gil Ast

This paper develops simplified mathematical models describing the mutation-selection balance for the asexual and sexual replication pathways in {\it Saccharomyces cerevisiae}. We assume diploid genomes consisting of two chromosomes, and we…

Populations and Evolution · Quantitative Biology 2007-12-21 Emmanuel Tannenbaum

Sexual selection theory models evolution of sexual signals and preferences using simple life histories. However, life-history models predict that males benefit from increasing sexual investment approaching old age, producing age-dependent…

Populations and Evolution · Quantitative Biology 2013-12-16 Joel James Adamson

Genetic inactivation of essential genes creates an evolutionary scenario distinct from escape from drug inhibition, but the mechanisms of microbe adaptations in such cases remain unknown. Here we inactivate E. coli dihydrofolate reductase…

Populations and Evolution · Quantitative Biology 2019-02-19 João V. Rodrigues , Eugene Shakhnovich

Life is a complex biological phenomenon represented by numerous chemical, physical and biological processes performed by a biothermodynamic system/cell/organism. Both living organisms and inanimate objects are subject to aging, a biological…

Other Quantitative Biology · Quantitative Biology 2018-01-25 Marko Popovic

Due to the conventional distinction between ecological (rapid) and evolutionary (slow)timescales, ecological and population models to date have typically ignored the effects of evolution. Yet the potential for rapid evolutionary change has…

Populations and Evolution · Quantitative Biology 2012-11-20 Laura E. Jones , Stephen P. Ellner

A first adiabatic core is a transient object formed in the early phase of star formation. The observation of a first core is believed to be difficult because of its short lifetime and low luminosity. On the basis of radiation hydrodynamic…

Solar and Stellar Astrophysics · Physics 2011-03-18 Kengo Tomida , Masahiro N. Machida , Kazuya Saigo , Kohji Tomisaka , Tomoaki Matsumoto

When echinoderms are conceptualized as hydraulic entities, the early evolution of this group can be presented in a scenario which describes how a bilateral ancestor (an enteropneust-like organism) gradually evolved into a pentaradial…

Populations and Evolution · Quantitative Biology 2007-05-23 Michael Gudo

Efficient resolution of neuroinflammation and debris clearance is a key determinant of successful central nervous system regeneration. Regenerative vertebrates such as Danio rerio often exhibit faster immune resolution and debris clearance…

Biological Physics · Physics 2026-01-15 Enso O. Torres Alegre

Rhizomes play fundamental roles in plant evolution, persistence, and environmental adaptation by enabling clonal propagation, resource storage, and stress resilience. Despite their ecological and agronomic importance across diverse plant…

Populations and Evolution · Quantitative Biology 2026-01-19 Hongfei Chen , Jenn M. Coughlan