Related papers: On the Extremal Maximum Agreement Subtree Problem
In this work, we present an $\Omega\left(\min\{\log \Delta, \sqrt{\log n}\}\right)$ lower bound for Maximal Matching (MM) in $\Delta$-ary trees against randomized algorithms. By a folklore reduction, the same lower bound applies to Maximal…
We propose the first branch-&-price algorithm for the maximum agreement forest problem on unrooted binary trees: given two unrooted X-labelled binary trees we seek to partition X into a minimum number of blocks such that the induced…
We determine the maximum distance between any two of the center, centroid, and subtree core among trees with a given order. Corresponding results are obtained for trees with given maximum degree and also for trees with given diameter. The…
When considering the number of subtrees of trees, the extremal structures which maximize this number among binary trees and trees with a given maximum degree lead to some interesting facts that correlate to other graphical indices in…
In the critical beta-splitting model of a random $n$-leaf binary tree, leaf-sets are recursively split into subsets, and a set of $m$ leaves is split into subsets containing $i$ and $m-i$ leaves with probabilities proportional to…
Imagine we want to split a group of agents into teams in the most \emph{efficient} way, considering that each agent has their own preferences about their teammates. This scenario is modeled by the extensively studied \textsc{Coalition…
The minimal number of rooted subtree prune and regraft (rSPR) operations needed to transform one phylogenetic tree into another one induces a metric on phylogenetic trees - the rSPR-distance. The rSPR-distance between two phylogenetic trees…
Phylogenetic (i.e. leaf-labeled) trees play a fundamental role in evolutionary research. A typical problem is to reconstruct such trees from data like DNA alignments (whose columns are often referred to as characters), and a simple…
The minimum linear arrangement problem on a network consists of finding the minimum sum of edge lengths that can be achieved when the vertices are arranged linearly. Although there are algorithms to solve this problem on trees in polynomial…
A vertex subset of a graph is called a distance-$k$ independent set if the distance between any two of its distinct vertices is at least $k + 1$. For all $n,k \geq 1$, we determine the minimum possible number of inclusion-wise maximal…
This paper considers the asymptotic distribution of the longest edge of the minimal spanning tree and nearest neighbor graph on X_1,...,X_{N_n} where X_1,X_2,... are i.i.d. in \Re^2 with distribution F and N_n is independent of the X_i and…
The celebrated result of Koml\'os, S\'ark\"ozy, and Szemer\'edi states that for any $\varepsilon>0$, there exists $0<c<1$, such that for all sufficiently large $n$, every $n$-vertex graph $G$ with $\delta(G)\geq(1/2+\varepsilon)n$ contains…
We consider the counting problem of the number of \textit{leaf-labeled increasing trees}, where internal nodes may have an arbitrary number of descendants. The set of all such trees is a discrete representation of the genealogies obtained…
In this paper, we investigate a problem concerning quartets, which are a particular type of tree on four leaves. Loosely speaking, a set of quartets is said to be `definitive' if it completely encapsulates the structure of some larger tree,…
There exist several methods dealing with the reconstruction of rooted phylogenetic networks explaining different evolutionary histories given by rooted binary phylogenetic trees. In practice, however, due to insufficient information of the…
Different sources of information might tell different stories about the evolutionary history of a given set of species. This leads to (rooted) phylogenetic trees that "disagree" on triples of species, which we call "conflict triples". An…
We estimate the size of a labelled tree by comparing the amount of (labelled) nodes with the size of the set of labels. Roughly speaking, a exponentially big labelled tree, is any labelled tree that has an exponential gap between its size,…
The largest common embeddable subtree problem asks for the largest possible tree embeddable into two input trees and generalizes the classical maximum common subtree problem. Several variants of the problem in labeled and unlabeled rooted…
A variant of the Erd\H{o}s-S\'os conjecture, posed by Havet, Reed, Stein and Wood, states that every graph with minimum degree at least $\lfloor 2k/3 \rfloor$ and maximum degree at least $k$ contains a copy of every tree with $k$ edges.…
This note defines a notion of multiplicity for nodes in a rooted tree and presents an asymptotic calculation of the maximum multiplicity over all leaves in a Bienaym\'e-Galton-Watson tree with critical offspring distribution $\xi$,…