Related papers: On the Extremal Maximum Agreement Subtree Problem
In this paper, we study a number of well-known combinatorial optimization problems that fit in the following paradigm: the input is a collection of (potentially inconsistent) local relationships between the elements of a ground set (e.g.,…
In the study of extensions of polytopes of combinatorial optimization problems, a notorious open question is that for the size of the smallest extended formulation of the Minimum Spanning Tree problem on a complete graph with $n$ nodes. The…
Tanglegrams are special graphs that consist of a pair of rooted binary trees with the same number of leaves, and a perfect matching between the two leaf-sets. These objects are of use in phylogenetics and are represented with straightline…
We consider the problem of exploring an unknown tree with a team of $k$ initially colocated mobile agents. Each agent has limited energy and cannot, as a result, traverse more than $B$ edges. The goal is to maximize the number of nodes…
We show that for any two values $\alpha, \beta >0 $ for which $\alpha+\beta>1$ then there is a value $N$ so that for all $n \geq N$ the following holds. For any binary phylogenetic tree $T$ on $n$ leaves there is a set of $\lfloor n^\alpha…
Given $d\geq 2$ and two rooted $d$-ary trees $D$ and $T$ such that $D$ has $k$ leaves, the density $\gamma(D,T)$ of $D$ in $T$ is the proportion of all $k$-element subsets of leaves of $T$ that induce a tree isomorphic to $D$, after erasing…
Given a Galton-Watson process conditioned to have total progeny equal to $n$, we study the asymptotic probability that this conditioned Galton-Watson process has distance to the border bigger or equal than $k$, as the number of nodes $n…
A tree-based network on a set $X$ of $n$ leaves is said to be universal if any rooted binary phylogenetic tree on $X$ can be its base tree. Francis and Steel showed that there is a universal tree-based network on $X$ in the case of $n=3$,…
We prove almost sure convergence of the maximum degree in an evolving graph model combining a growing number of local choices with sublinear preferential attachment. At each step in the growth of the graph, a new vertex is introduced. Then…
We consider the minimum spanning tree problem in a setting where the edge weights are stochastic from unknown distributions, and the only available information is a single sample of each edge's weight distribution. In this setting, we…
Let $L(n,d)$ denote the minimum possible number of leaves in a tree of order $n$ and diameter $d.$ In 1975 Lesniak gave the lower bound $B(n,d)=\lceil 2(n-1)/d\rceil$ for $L(n,d).$ When $d$ is even, $B(n,d)=L(n,d).$ But when $d$ is odd,…
In the study of extensions of polytopes of combinatorial optimization problems, a notorious open question is that for the size of the smallest extended formulation of the Minimum Spanning Tree problem on a complete graph with $n$ nodes. The…
Among all trees on $n$ vertices with a given degree sequence, how do we maximise or minimise the sum over all adjacent pairs of vertices $x$ and $y$ of $f(\mathrm{deg} x, \mathrm{deg} y)$? Here $f$ is a fixed symmetric function satisfying a…
Supertree methods are tree reconstruction techniques that combine several smaller gene trees (possibly on different sets of species) to build a larger species tree. The question of interest is whether the reconstructed supertree converges…
A $k$-universal permutation, or $k$-superpermutation, is a permutation that contains all permutations of length $k$ as patterns. The problem of finding the minimum length of a $k$-superpermutation has recently received significant attention…
We call a coupling of two stochastic processes which maximizes the time until the first disagreement a maximal agreement coupling. We show that such a coupling always exists. Furthermore, it is possible to construct a lower bound on the…
In this note, we obtain an upper bound on the maximum number of distinct non-empty palindromes in starlike trees. This bound implies, in particular, that there are at most $4n$ distinct non-empty palindromes in a starlike tree with three…
We study the height and width of a Galton--Watson tree with offspring distribution B satisfying E(B)=1, 0 < Var(B) < infinity, conditioned on having exactly n nodes. Under this conditioning, we derive sub-Gaussian tail bounds for both the…
The maximum/minimum bisection problems are, given an edge-weighted graph, to find a bipartition of the vertex set into two sets whose sizes differ by at most one, such that the total weight of edges between the two sets is…
We study fully dynamic algorithms for maximum matching. This is a well-studied problem, known to admit several update-time/approximation trade-offs. For instance, it is known how to maintain a 1/2-approximate matching in $\log^{O(1)} n$…