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The local search algorithm WSat is one of the most successful algorithms for solving the satisfiability (SAT) problem. It is notably effective at solving hard Random 3-SAT instances near the so-called `satisfiability threshold', but still…

Artificial Intelligence · Computer Science 2011-06-02 I. P. Gent , J. Singer , A. Smaill

While modern biotechnologies allow synthesizing new proteins and function measurements at scale, efficiently exploring a protein sequence space and engineering it remains a daunting task due to the vast sequence space of any given protein.…

Biomolecules · Quantitative Biology 2024-01-15 Jiahao Qiu , Hui Yuan , Jinghong Zhang , Wentao Chen , Huazheng Wang , Mengdi Wang

We study the problem of maximizing the number of spanning trees in a connected graph by adding at most $k$ edges from a given candidate edge set. We give both algorithmic and hardness results for this problem: - We give a greedy algorithm…

Data Structures and Algorithms · Computer Science 2018-07-17 Huan Li , Stacy Patterson , Yuhao Yi , Zhongzhi Zhang

In the dynamic set cover problem, the input is a dynamic universe of elements and a fixed collection of sets. As elements are inserted or deleted, the goal is to efficiently maintain an approximate minimum set cover. While the past decade…

Data Structures and Algorithms · Computer Science 2026-04-06 Amitai Uzrad

We propose a multinomial logistic regression model for link prediction in a time series of directed binary networks. To account for the dynamic nature of the data we employ a dynamic model for the model parameters that is strongly connected…

Applications · Statistics 2017-10-05 Brenda Betancourt , Abel Rodríguez , Naomi Boyd

SEATER is a generative retrieval model that improves recommendation inference efficiency and retrieval quality by utilizing balanced tree-structured item identifiers and contrastive training objectives. We reproduce and validate SEATER's…

Information Retrieval · Computer Science 2026-01-21 Federica Valeau , Odysseas Boufalis , Polytimi Gkotsi , Joshua Rosenthal , David Vos

Alphabetic codes and binary search trees are combinatorial structures that abstract search procedures in ordered sets endowed with probability distributions. In this paper, we design new linear-time algorithms to construct alphabetic codes,…

Information Theory · Computer Science 2024-07-24 Roberto Bruno , Roberto De Prisco , Alfredo De Santis , Ugo Vaccaro

Bayesian Reinforcement Learning (RL) is capable of not only incorporating domain knowledge, but also solving the exploration-exploitation dilemma in a natural way. As Bayesian RL is intractable except for special cases, previous work has…

Artificial Intelligence · Computer Science 2013-06-14 Kenji Kawaguchi , Mauricio Araya

Given the proximity of many wireless users and their diversity in consuming local resources (e.g., data-plans, computation and energy resources), device-to-device (D2D) resource sharing is a promising approach towards realizing a sharing…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-05-23 Shuqin Gao , Costas A. Courcoubetis , Lingjie Duan

Local search is widely used to solve combinatorial optimisation problems and to model biological evolution, but the performance of local search algorithms on different kinds of fitness landscapes is poorly understood. Here we consider how…

Data Structures and Algorithms · Computer Science 2020-11-13 Artem Kaznatcheev , David A. Cohen , Peter G. Jeavons

Tree kernels have been proposed to be used in many areas as the automatic learning of natural language applications. In this paper, we propose a new linear time algorithm based on the concept of weighted tree automata for SubTree kernel…

Computation and Language · Computer Science 2023-02-03 Ludovic Mignot , Faissal Ouardi , Djelloul Ziadi

Weight-balanced trees are a popular form of self-balancing binary search trees. Their popularity is due to desirable guarantees, for example regarding the required work to balance annotated trees. While usual weight-balanced trees perform…

Data Structures and Algorithms · Computer Science 2020-02-11 Lukas Barth , Dorothea Wagner

Recently, greedy algorithm has received much attention as a cost-effective means to reconstruct the sparse signals from compressed measurements. Much of previous work has focused on the investigation of a single candidate to identify the…

Information Theory · Computer Science 2014-09-22 Jaeseok Lee , Suhyuk Kwon , Jun Won Choi , Byonghyo Shim

We consider the following natural generalization of Binary Search: in a given undirected, positively weighted graph, one vertex is a target. The algorithm's task is to identify the target by adaptively querying vertices. In response to…

Data Structures and Algorithms · Computer Science 2017-08-01 Ehsan Emamjomeh-Zadeh , David Kempe , Vikrant Singhal

We give the first algorithm that maintains an approximate decision tree over an arbitrary sequence of insertions and deletions of labeled examples, with strong guarantees on the worst-case running time per update request. For instance, we…

Data Structures and Algorithms · Computer Science 2023-02-13 Marco Bressan , Mauro Sozio

Fixed tree topologies are widely used in phylodynamic analyses to reduce computational burden, yet the consequences of this assumption remain insufficiently understood. Here, we systematically assess the impact of various fixed-topology…

Populations and Evolution · Quantitative Biology 2025-12-01 Mathieu Fourment , Jiansi Gao , Marc A Suchard , Frederick A Matsen

We study a logistic model-based active learning procedure for binary classification problems, in which we adopt a batch subject selection strategy with a modified sequential experimental design method. Moreover, accompanying the proposed…

Machine Learning · Statistics 2018-02-02 Hsiang-Ling Hsu , Yuan-Chin Ivan Chang , Ray-Bing Chen

The contextual bandit literature has traditionally focused on algorithms that address the exploration-exploitation tradeoff. In particular, greedy algorithms that exploit current estimates without any exploration may be sub-optimal in…

Machine Learning · Statistics 2020-04-21 Hamsa Bastani , Mohsen Bayati , Khashayar Khosravi

For a graph $G$ and a non-negative integral weight function $w$ on the vertex set of $G$, a set $S$ of vertices of $G$ is $w$-safe if $w(C)\geq w(D)$ for every component $C$ of the subgraph of $G$ induced by $S$ and every component $D$ of…

Combinatorics · Mathematics 2017-12-05 Stefan Ehard , Dieter Rautenbach

This paper studies graph-based active learning, where the goal is to reconstruct a binary signal defined on the nodes of a weighted graph, by sampling it on a small subset of the nodes. A new sampling algorithm is proposed, which…

Machine Learning · Computer Science 2016-05-19 Eyal En Gad , Akshay Gadde , A. Salman Avestimehr , Antonio Ortega