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In this paper we introduce and study three new measures for efficient discriminative comparison of phylogenetic trees. The NNI navigation dissimilarity $d_{nav}$ counts the steps along a "combing" of the Nearest Neighbor Interchange (NNI)…

Populations and Evolution · Quantitative Biology 2015-10-21 Omur Arslan , Dan P. Guralnik , Daniel E. Koditschek

We study popular local search and greedy algorithms for scheduling. The performance guarantee of these algorithms is well understood, but the worst-case lower bounds seem somewhat contrived and it is questionable if they arise in practical…

Data Structures and Algorithms · Computer Science 2013-04-29 Tobias Brunsch , Heiko Röglin , Cyriel Rutten , Tjark Vredeveld

We consider a weighted counting problem on matchings, denoted $\textrm{PrMatching}(\mathcal{G})$, on an arbitrary fixed graph family $\mathcal{G}$. The input consists of a graph $G\in \mathcal{G}$ and of rational probabilities of existence…

Computational Complexity · Computer Science 2023-01-10 Antoine Amarilli , Mikaël Monet

It has been shown in the indexing literature that there is an essential difference between prefix/range searches on the one hand, and predecessor/rank searches on the other hand, in that the former provably allows faster query resolution.…

Data Structures and Algorithms · Computer Science 2018-04-16 Djamal Belazzougui , Paolo Boldi , Rasmus Pagh , Sebastiano Vigna

Maximum weight matching is one of the most fundamental combinatorial optimization problems with a wide range of applications in data mining and bioinformatics. Developing distributed weighted matching algorithms is challenging due to the…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-06-06 Sepehr Assadi , MohammadHossein Bateni , Vahab Mirrokni

Regression trees are one of the oldest forms of AI models, and their predictions can be made without a calculator, which makes them broadly useful, particularly for high-stakes applications. Within the large literature on regression trees,…

Machine Learning · Computer Science 2023-04-11 Rui Zhang , Rui Xin , Margo Seltzer , Cynthia Rudin

Finding a maximum-weight matching is a classical and well-studied problem in computer science, solvable in cubic time in general graphs. We consider the specialization called assignment problem where the input is a bipartite graph, and…

Data Structures and Algorithms · Computer Science 2024-10-15 Romaric Duvignau , Noël Gillet , Ralf Klasing

Bandit based methods for tree search have recently gained popularity when applied to huge trees, e.g. in the game of go [6]. Their efficient exploration of the tree enables to re- turn rapidly a good value, and improve preci- sion if more…

Artificial Intelligence · Computer Science 2014-08-12 Pierre-Arnuad Coquelin , Remi Munos

We consider random binary trees that appear as the output of certain standard algorithms for sorting and searching if the input is random. We introduce the subtree size metric on search trees and show that the resulting metric spaces…

Probability · Mathematics 2014-05-06 Rudolf Grübel

We study the distributed detection problem in a balanced binary relay tree, where the leaves of the tree are sensors generating binary messages. The root of the tree is a fusion center that makes the overall decision. Every other node in…

Information Theory · Computer Science 2012-10-17 Zhenliang Zhang , Edwin K. P. Chong , Ali Pezeshki , William Moran , Stephen D. Howard

Bayesian Decision Trees are known for their probabilistic interpretability. However, their construction can sometimes be costly. In this article we present a general Bayesian Decision Tree algorithm applicable to both regression and…

Machine Learning · Statistics 2020-09-23 Giuseppe Nuti , Lluís Antoni Jiménez Rugama , Andreea-Ingrid Cross

This paper deals with the size of the spanning tree of p randomly chosen nodes in a binary search tree. It is shown via generating functions methods, that for fixed p, the (normalized) spanning tree size converges in law to the Normal…

Probability · Mathematics 2007-05-23 Alois Panholzer , Helmut Prodinger

Approximate K-Nearest Neighbor Search (AKNNS) has now become ubiquitous in modern applications, for example, as a fast search procedure with two tower deep learning models. Graph-based methods for AKNNS in particular have received great…

Machine Learning · Computer Science 2022-06-24 Patrick H. Chen , Chang Wei-cheng , Yu Hsiang-fu , Inderjit S. Dhillon , Hsieh Cho-jui

We analyze variational inference for highly symmetric graphical models such as those arising from first-order probabilistic models. We first show that for these graphical models, the tree-reweighted variational objective lends itself to a…

Artificial Intelligence · Computer Science 2014-06-23 Hung Hai Bui , Tuyen N. Huynh , David Sontag

We revisit weight-balanced trees, also known as trees of bounded balance. This class of binary search trees was invented by Nievergelt and Reingold in 1972. Such trees are obtained by assigning a weight to each node and requesting that the…

Data Structures and Algorithms · Computer Science 2025-07-08 Vincent Jugé

The ubiquity of deep learning algorithms in various applications has amplified the need for assuring their robustness against small input perturbations such as those occurring in adversarial attacks. Existing complete verification…

Machine Learning · Computer Science 2024-06-17 Matthias König , Xiyue Zhang , Holger H. Hoos , Marta Kwiatkowska , Jan N. van Rijn

We present a new connection between self-adjusting binary search trees (BSTs) and heaps, two fundamental, extensively studied, and practically relevant families of data structures. Roughly speaking, we map an arbitrary heap algorithm within…

Data Structures and Algorithms · Computer Science 2019-01-01 László Kozma , Thatchaphol Saranurak

Sequential learning problems are common in several fields of research and practical applications. Examples include dynamic pricing and assortment, design of auctions and incentives and permeate a large number of sequential treatment…

Machine Learning · Statistics 2024-03-26 Claudio Cardoso Flores , Marcelo Cunha Medeiros

Greedy algorithms are widely used for problems in machine learning such as feature selection and set function optimization. Unfortunately, for large datasets, the running time of even greedy algorithms can be quite high. This is because for…

Machine Learning · Statistics 2017-03-09 Rajiv Khanna , Ethan Elenberg , Alexandros G. Dimakis , Sahand Negahban , Joydeep Ghosh

A weighted recursive tree is an evolving tree in which vertices are assigned random vertex-weights and new vertices connect to a predecessor with a probability proportional to its weight. Here, we study the maximum degree and near-maximum…

Probability · Mathematics 2023-01-31 Laura Eslava , Bas Lodewijks , Marcel Ortgiese