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Current deep learning-based approaches for the segmentation of microscopy images heavily rely on large amount of training data with dense annotation, which is highly costly and laborious in practice. Compared to full annotation where the…

Computer Vision and Pattern Recognition · Computer Science 2023-12-11 Shijie Li , Mengwei Ren , Thomas Ach , Guido Gerig

Image reconstruction in the presence of severe degradation remains a challenging inverse problem, particularly in beam diagnostics for high-energy physics accelerators. As modern facilities demand precise detection of beam halo structures…

Computer Vision and Pattern Recognition · Computer Science 2026-03-10 Francis Osswald , Mohammed Chahbaoui , Xinyi Liang

The lensless endoscope is a promising device designed to image tissues in vivo at the cellular scale. The traditional acquisition setup consists in raster scanning during which the focused light beam from the optical fiber illuminates…

Computer Vision and Pattern Recognition · Computer Science 2018-10-31 Stéphanie Guérit , Siddharth Sivankutty , Camille Scotté , John Alto Lee , Hervé Rigneault , Laurent Jacques

Digital technologies have made it possible to deploy visual sensor nodes capable of detecting motion events in the coverage area cost-effectively. However, background subtraction, as a widely used approach, remains an intractable task due…

Signal Processing · Electrical Eng. & Systems 2023-02-13 Sepehr Tabrizchi , Mehrdad Morsali , Shaahin Angizi , Arman Roohi

Driven by life-science applications, mega-electron-volt Scanning Transmission Electron Microscope (MeV-STEM) has been proposed to image thick biological samples. The high penetration of inelastic scattering signals of MeV electrons could…

Instrumentation and Detectors · Physics 2023-11-08 X. Yang , L. Wang , J. Maxson , A. Bartnik , M. Kaemingk , W. Wan , L. Cultrera , L. Wu , V. Smaluk , T. Shaftan , S. McSweeney , C. Jing , R. Kostin , Y. Zhu

The nanoparticle size and distribution information in the SEM images of silicon crystals are generally counted by manual methods. The realization of automatic machine recognition is significant in materials science. This paper proposed a…

Computer Vision and Pattern Recognition · Computer Science 2022-06-07 Ruiling Xiao , Jiayang Niu

While the Segment Anything Model (SAM) excels in semantic segmentation for general-purpose images, its performance significantly deteriorates when applied to medical images, primarily attributable to insufficient representation of medical…

Computer Vision and Pattern Recognition · Computer Science 2023-11-07 Yiming Zhang , Tianang Leng , Kun Han , Xiaohui Xie

Purpose: To develop an automated machine-learning-based method for the discovery of rapid and quantitative chemical exchange saturation transfer (CEST) MR fingerprinting acquisition and reconstruction protocols. Methods: An MR physics…

Medical Physics · Physics 2022-02-01 Or Perlman , Bo Zhu , Moritz Zaiss , Matthew S. Rosen , Christian T. Farrar

In the effort to aid cytologic diagnostics by establishing automatic single cell screening using high throughput digital holographic microscopy for clinical studies thousands of images and millions of cells are captured. The bottleneck lies…

Image and Video Processing · Electrical Eng. & Systems 2024-10-28 Julia Sistermanns , Ellen Emken , Gregor Weirich , Oliver Hayden , Wolfgang Utschick

The extraordinary improvements of modern imaging devices offer access to data with unprecedented information content. However, widely used image processing methodologies fall far short of exploiting the full breadth of information offered…

Computer Vision and Pattern Recognition · Computer Science 2014-03-27 Benjamin Berkels , Peter Binev , Douglas A. Blom , Wolfgang Dahmen , Robert C. Sharpley , Thomas Vogt

We report a new approach for progressive and well-controlled downsizing of nanostructures below the 10 nm scale. Low energetic ion beam (Ar+) is used for gentle surface erosion, progressively shrinking the dimensions with ~ 1 nm accuracy.…

Mesoscale and Nanoscale Physics · Physics 2015-05-13 M. Zgirski , K. P. Riikonen , V. Tuboltsev , P. Jalkanen , T. T. Hongisto , K. Yu Arutyunov

Particle picking is currently a critical step in the cryo-electron microscopy single particle reconstruction pipeline. Contaminations in the acquired micrographs severely degrade the performance of particle pickers, resulting is many…

Computer Vision and Pattern Recognition · Computer Science 2022-01-19 Amitay Eldar , Ido Amos , Yoel Shkolnisky

Single-shot images are the standard readout of experiments with ultracold atoms -- the tarnished looking glass into their many-body physics. The efficient extraction of observables from single-shot images is thus crucial. Here, we…

Estimating personalized treatment effects from high-dimensional observational data is essential in situations where experimental designs are infeasible, unethical, or expensive. Existing approaches rely on fitting deep models on outcomes…

Machine Learning · Computer Science 2022-02-02 Andrew Jesson , Panagiotis Tigas , Joost van Amersfoort , Andreas Kirsch , Uri Shalit , Yarin Gal

Here we show that compressive sensing allow 4-dimensional (4-D) STEM data to be obtained and accurately reconstructed with both high-speed and low fluence. The methodology needed to achieve these results compared to conventional 4-D…

Perhaps surprisingly, the total electron microscopy (EM) data collected to date is less than a cubic millimeter. Consequently, there is an enormous demand in the materials and biological sciences to image at greater speed and lower dosage,…

Computer Vision and Pattern Recognition · Computer Science 2016-12-06 Suhas Sreehari , S. V. Venkatakrishnan , Katherine L. Bouman , Jeffrey P. Simmons , Lawrence F. Drummy , Charles A. Bouman

This publication presents an investigation of the performance of different analytical electron ptychography methods for low-dose imaging. In particular, benchmarking is performed for two model-objects, monolayer MoS$_2$ and apoferritin, by…

Applied Physics · Physics 2025-05-20 Hoelen L. Lalandec Robert , Max Leo Leidl , Knut Müller-Caspary , Jo Verbeeck

In this paper we show that the sensitivity of absorption imaging of ultracold atoms can be significantly improved by imaging in a standing-wave configuration. We present simulations of single-atom absorption imaging both for a…

Atomic Physics · Physics 2014-02-13 Atreju Tauschinsky , Robert J. C. Spreeuw

Low-dose emission tomography (ET) plays a crucial role in medical imaging, enabling the acquisition of functional information for various biological processes while minimizing the patient dose. However, the inherent randomness in the photon…

We measure the absolute absorption cross section of molecules using a matter-wave interferometer. A nanostructured density distribution is imprinted onto a dilute molecular beam through quantum interference. As the beam crosses the light…

Quantum Physics · Physics 2014-08-20 Sandra Eibenberger , Xiaxi Cheng , J. P. Cotter , Markus Arndt