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Recent results on supercomputers show that beyond 65K cores, the efficiency of molecular dynamics simulations of interfacial systems decreases significantly. In this paper, we introduce a dynamic cutoff method (DCM) for interfacial systems…

Computational Physics · Physics 2017-01-23 Paul Springer , Ahmed E. Ismail , Paolo Bientinesi

Structured sparsity enables deploying large language models (LLMs) on resource-constrained systems. Approaches like dense-to-sparse fine-tuning are particularly compelling, achieving remarkable structured sparsity by reducing the model size…

Hardware Architecture · Computer Science 2025-10-14 João Paulo Cardoso de Lima , Marc Dietrich , Jeronimo Castrillon , Asif Ali Khan

This paper advocates for an intertwined design of the dense linear algebra software stack that breaks down the strict barriers between the high-level, blocked algorithms in LAPACK (Linear Algebra PACKage) and the low-level,…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-05-01 Héctor Martínez , Sandra Catalán , Francisco D. Igual , José R. Herrero , Rafael Rodríguez-Sánchez , Enrique S. Quintana-Ortí

Fast algorithms for the computation of $N$-body problems can be broadly classified into mesh-based interpolation methods, and hierarchical or multiresolution methods. To this last class belongs the well-known fast multipole method (FMM),…

Distributed, Parallel, and Cluster Computing · Computer Science 2011-09-21 Felipe A. Cruz , Matthew G. Knepley , L. A. Barba

We present an application of the blackbox matrix-matrix multiplication (BBMM) algorithm to scale up the Gaussian Process (GP) training of molecular energies in the molecular-orbital based machine learning (MOB-ML) framework. An alternative…

Chemical Physics · Physics 2023-03-28 Jiace Sun , Lixue Cheng , Thomas F. Miller

We present an optimized single-precision implementation of the Sparse Approximate Matrix Multiply (\SpAMM{}) [M. Challacombe and N. Bock, arXiv {\bf 1011.3534} (2010)], a fast algorithm for matrix-matrix multiplication for matrices with…

Numerical Analysis · Computer Science 2012-09-05 Nicolas Bock , Matt Challacombe

Low power deep learning accelerators on the speech processing enable real-time applications on edge devices. However, most of the existing accelerators suffer from high power consumption and focus on image applications only. This paper…

Sound · Computer Science 2023-12-18 Chih-Chyau Yang , Tian-Sheuan Chang

In the realm of unsupervised learning, Bayesian nonparametric mixture models, exemplified by the Dirichlet Process Mixture Model (DPMM), provide a principled approach for adapting the complexity of the model to the data. Such models are…

Machine Learning · Computer Science 2022-04-20 Or Dinari , Raz Zamir , John W. Fisher , Oren Freifeld

The Adapteva Epiphany many-core architecture comprises a scalable 2D mesh Network-on-Chip (NoC) of low-power RISC cores with minimal uncore functionality. Whereas such a processor offers high computational energy efficiency and parallel…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-04-28 David Richie , James Ross , Jamie Infantolino

With the fast growth of parameter size, it becomes increasingly challenging to deploy large generative models as they typically require large GPU memory consumption and massive computation. Unstructured model pruning has been a common…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-09-20 Haojun Xia , Zhen Zheng , Yuchao Li , Donglin Zhuang , Zhongzhu Zhou , Xiafei Qiu , Yong Li , Wei Lin , Shuaiwen Leon Song

This paper presents a programmable in-memory-computing processor, demonstrated in a 65nm CMOS technology. For data-centric workloads, such as deep neural networks, data movement often dominates when implemented with today's computing…

Hardware Architecture · Computer Science 2020-09-17 Hongyang Jia , Yinqi Tang , Hossein Valavi , Jintao Zhang , Naveen Verma

Sampling from a categorical distribution is mathematically simple, but in large-vocabulary decoding, it often triggers extra memory traffic and extra kernels after the LM head. We present FlashSampling, an exact sampling primitive that…

Machine Learning · Computer Science 2026-05-14 Tomas Ruiz , Zhen Qin , Yifan Zhang , Xuyang Shen , Yiran Zhong , Mengdi Wang

We present a novel low latency CMOS hardware accelerator for fully connected (FC) layers in deep neural networks (DNNs). The FC accelerator, FC-ACCL, is based on 128 8x8 or 16x16 processing elements (PEs) for matrix-vector multiplication,…

Hardware Architecture · Computer Science 2020-11-26 Nick Iliev , Amit Ranjan Trivedi

The paper presents AMGCL -- an opensource C++ library implementing the algebraic multigrid method (AMG) for solution of large sparse linear systems of equations, usually arising from discretization of partial differential equations on an…

Mathematical Software · Computer Science 2019-06-26 Denis Demidov

Among the algorithms that are likely to play a major role in future exascale computing, the fast multipole method (FMM) appears as a rising star. Our previous recent work showed scaling of an FMM on GPU clusters, with problem sizes in the…

Numerical Analysis · Computer Science 2012-10-30 Rio Yokota , Lorena Barba

Long Short-term Memory Networks (LSTMs) are a vital Deep Learning technique suitable for performing on-device time series analysis on local sensor data streams of embedded devices. In this paper, we propose a new hardware accelerator design…

Hardware Architecture · Computer Science 2026-04-22 Chao Qian , Tianheng Ling , Gregor Schiele

We present teraflop-scale calculations of biomolecular electrostatics enabled by the combination of algorithmic and hardware acceleration. The algorithmic acceleration is achieved with the fast multipole method (FMM) in conjunction with a…

Computational Engineering, Finance, and Science · Computer Science 2011-09-21 Rio Yokota , Jaydeep P. Bardhan , Matthew G. Knepley , L. A. Barba , Tsuyoshi Hamada

CXL (Compute Express Link) enables multiple hosts to share byte-addressable memory with hardware cache coherence, but no existing filesystem exploits this for lock-free multi-host coordination. We present DaxFS, a Linux filesystem for CXL…

Operating Systems · Computer Science 2026-04-03 Cong Wang , Yiwei Yang , Yusheng Zheng

Accelerators for sparse matrix multiplication are important components in emerging systems. In this paper, we study the main challenges of accelerating Sparse Matrix Multiplication (SpMM). For the situations that data is not stored in the…

Hardware Architecture · Computer Science 2019-06-04 Pareesa Ameneh Golnari , Sharad Malik

Large-scale atomistic simulations are essential to bridge computational materials and chemistry to realistic materials and drug discovery applications. In the past few years, rapid developments of machine learning interatomic potentials…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-02-03 Kevin Han , Bowen Deng , Amir Barati Farimani , Gerbrand Ceder