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The popularity of Python has risen rapidly over the past 15 years. It is a major language in some of the most exciting technologies today. This popularity has led to a large ecosystem of third-party packages available via the pip package…

Cryptography and Security · Computer Science 2021-02-15 Aadesh Bagmar , Josiah Wedgwood , Dave Levin , Jim Purtilo

High performance computing (HPC) software ecosystems are inherently heterogeneous, comprising scientific applications that depend on hundreds of external packages, each with distinct build systems, options, and dependency constraints. Tools…

Software Engineering · Computer Science 2025-11-11 Caetano Melone , Daniel Nichols , Konstantinos Parasyris , Todd Gamblin , Harshitha Menon

Software ecosystems rely on centralized package registries, such as Maven, to enable code reuse and collaboration. However, the interconnected nature of these ecosystems amplifies the risks posed by security vulnerabilities in direct and…

Software Engineering · Computer Science 2025-02-18 Corey Yang-Smith , Ahmad Abdellatif

Third-party libraries with rich functionalities facilitate the fast development of Node.js software, but also bring new security threats that vulnerabilities could be introduced through dependencies. In particular, the threats could be…

Software Engineering · Computer Science 2022-08-30 Chengwei Liu , Sen Chen , Lingling Fan , Bihuan Chen , Yang Liu , Xin Peng

Popular (re)use of third-party open-source software (OSS) is evidence of the impact of hosting repositories like maven on software development today. Updating libraries is crucial, with recent studies highlighting the associated…

Software Engineering · Computer Science 2017-09-15 Raula Gaikovina Kula , Coen De Roover , Daniel M. German , Takashi Ishio , Katsuro Inoue

Third party libraries are used to integrate existing solutions for common problems and help speed up development. The use of third party libraries, however, can carry risks, for example through vulnerabilities in these libraries. Studying…

Software Engineering · Computer Science 2022-06-14 Kristiina Rahkema , Dietmar Pfahl

In this research, we provide a comprehensive empirical summary of the Python Package Repository, PyPI, including both package metadata and source code covering 178,592 packages, 1,745,744 releases, 76,997 contributors, and 156,816,750…

Software Engineering · Computer Science 2019-07-29 Ethan Bommarito , Michael Bommarito

The Log4j-Core vulnerability, known as Log4Shell, exposed significant challenges to dependency management in software ecosystems. When a critical vulnerability is disclosed, it is imperative that dependent packages quickly adopt patched…

This technical report accompanies a research article that empirically studies the problems related to inter-repository package dependencies in the R ecosystem of statistical computing, with a focus on R packages hosted on CRAN and GitHub.…

Software Engineering · Computer Science 2016-06-20 Tom Mens

Library dependencies in software ecosystems play a crucial role in the development of software. As newer releases of these libraries are published, developers may opt to pin their dependencies to a particular version. While pinning may have…

Software Engineering · Computer Science 2025-12-22 Vasudev Vikram , Yuvraj Agarwal , Rohan Padhye

Modern software systems are expected to be secure and contain all the latest features, even when new versions of software are released multiple times an hour. Each system may include many interacting packages. The problem of installing…

Software Engineering · Computer Science 2018-11-15 Ran Ben Basat , Maayan Goldstein , Itai Segall

Modern software systems have transitioned from purely code-based architectures to AI-integrated systems where pre-trained models (PTMs) serve as permanent dependencies. However, while the evolution of traditional software libraries is…

Software Engineering · Computer Science 2026-04-21 Peerachai Banyongrakkul , Mansooreh Zahedi , Christoph Treude , Haoyu Gao , Patanamon Thongtanunam

Open-source software is increasingly reused, complicating the process of patching to repair bugs. In the case of Linux, a distinct ecosystem has formed, with Linux mainline serving as the upstream, stable or long-term-support (LTS) systems…

Software Engineering · Computer Science 2024-02-09 Xingyu Li , Zheng Zhang , Zhiyun Qian , Trent Jaeger , Chengyu Song

As modern software extensively uses open source packages, developers regularly pull in new upstream code through frequent updates. While a manual review of all upstream changes may not be practical, developers may rely on the authors' and…

Software Engineering · Computer Science 2023-06-02 Nasif Imtiaz , Preya Shabrina , Laurie Williams

The widespread use of package managers like Maven has accelerated software development but has also introduced significant security risks due to vulnerabilities in dependencies. In this study, we analyze the prevalence and impact of…

Software Engineering · Computer Science 2025-04-08 Ehtisham Ul Haq , Song Wang , Robert S. Allison

Packaging software into containers is becoming a common practice when deploying services in cloud and other environments. Docker images are one of the most popular container technologies for building and deploying containers. A container…

Software Engineering · Computer Science 2019-02-27 Ahmed Zerouali , Tom Mens , Gregorio Robles , Jesus Gonzalez-Barahona

Industry practitioners are increasingly concerned with software that contains vulnerable versions of third-party dependencies that are included both directly and transitively. To address this problem, projects are encouraged to both…

Software Engineering · Computer Science 2025-10-24 Imranur Rahman , Ranindya Paramitha , William Enck , Laurie Williams

Software systems often leverage on open source software libraries to reuse functionalities. Such libraries are readily available through software package managers like npm for JavaScript. Due to the huge amount of packages available in such…

Software Engineering · Computer Science 2019-02-27 Ahmed Zerouali , Tom Mens , Gregorio Robles , Jesus M. Gonzalez-Barahona

Open-source software (OSS) plays a crucial role in modern software development. Utilizing OSS code can greatly accelerate software development, reduce redundancy, and enhance reliability. Python, a widely adopted programming language, is…

Software Engineering · Computer Science 2024-08-21 Zhiqing Zhong , Shilin He , Haoxuan Wang , Boxi Yu , Haowen Yang , Pinjia He

The public package registry npm is one of the biggest software registry. With its 216 911 software packages, it forms a big network of software dependencies. In this paper we evaluate various methods for finding similar packages in the npm…

Social and Information Networks · Computer Science 2016-02-12 Tomislav Slijepčević
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