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Modern software engineering builds up on the composability of software components, that rely on more and more direct and transitive dependencies to build their functionalities. This principle of reusability however makes it harder to…

Software Engineering · Computer Science 2024-02-02 Julien Malka , Stefano Zacchiroli , Théo Zimmermann

Many popular open source programming languages (Perl, Ruby or Python for example) have systems for distributing packaged source code that software developers can use when working in that particular programming language. This paper will…

Programming Languages · Computer Science 2021-04-02 Seamus Brady

Scripting languages are continuously gaining popularity due to their ease of use and the flourishing software ecosystems that surround them. These languages offer crash and memory safety by design, thus, developers do not need to understand…

Cryptography and Security · Computer Science 2023-02-06 Cristian-Alexandru Staicu , Sazzadur Rahaman , Ágnes Kiss , Michael Backes

Born in the late 20s, R is one of the most popular software for statistical computing and graphics. With the development of information technology and the advent of the big data era, great changes have taken place in the R ecosystem. Based…

Other Statistics · Statistics 2026-05-19 Tian-Yuan Huang , Zhilan Lou

Neural networks are typically sensitive to small input perturbations, leading to unexpected or brittle behaviour. We present RobustNeuralNetworks.jl: a Julia package for neural network models that are constructed to naturally satisfy a set…

Machine Learning · Computer Science 2025-10-01 Nicholas H. Barbara , Max Revay , Ruigang Wang , Jing Cheng , Ian R. Manchester

In recent years, the research community has raised serious questions about the reproducibility of scientific work. In particular, since many studies include some kind of computing work, reproducibility is also a technological challenge, not…

Software Engineering · Computer Science 2023-08-03 Lázaro Costa , Susana Barbosa , Jácome Cunha

Software evolution is a fundamental process that transcends the realm of technical artifacts and permeates the entire organizational structure of a software project. By means of a longitudinal empirical study of 18 large open-source…

Software Engineering · Computer Science 2016-10-20 Mitchell Joblin , Sven Apel , Wolfgang Mauerer

Our study is focused on an evaluation of the maintainability characteristic in the context of the long-term evolution of open-source software. According to well established software quality models such as the ISO 9126 and the more recent…

Software Engineering · Computer Science 2020-09-03 Arthur-Jozsef Molnar , Simona Motogna

Third-party libraries are a central building block to develop software systems. However, outdated third-party libraries are commonly used, and developers are usually less aware of the potential risks. Therefore, a quantitative and holistic…

Software Engineering · Computer Science 2020-02-26 Ying Wang , Bihuan Chen , Kaifeng Huang , Bowen Shi , Congying Xu , Xin Peng , Yang Liu , Yijian Wu

The Rocker Project provides widely used Docker images for R across different application scenarios. This article surveys downstream projects that build upon the Rocker Project images and presents the current state of R packages for managing…

The Open Source Software movement has been growing exponentially for a number of years with no signs of slowing. Driving this growth is the widespread availability of libraries and frameworks that provide many functionalities. Developers…

Software Engineering · Computer Science 2022-06-22 Stan Zajdel , Diego Elias Costa , Hafedh Mili

The widespread dependency on open-source software makes it a fruitful target for malicious actors, as demonstrated by recurring attacks. The complexity of today's open-source supply chains results in a significant attack surface, giving…

Cryptography and Security · Computer Science 2023-07-19 Piergiorgio Ladisa , Henrik Plate , Matias Martinez , Olivier Barais

Trivial packages, small modules with low functionality, are common in the npm ecosystem and can pose security risks despite their simplicity. This paper refines existing definitions and introduce data-only packages that contain no…

Software Engineering · Computer Science 2025-10-07 Napasorn Tevarut , Brittany Reid , Yutaro Kashiwa , Pattara Leelaprute , Arnon Rungsawang , Bundit Manaskasemsak , Hajimu Iida

This paper brings mathematical tools to bear on the study of package dependencies in software systems. We introduce structures known as Dependency Structures with Choice (DSC) that provide a mathematical account of such dependencies,…

Category Theory · Mathematics 2024-10-15 Gershom Bazerman , Emilio Minichiello , Raymond Puzio

The reproducibility crisis in scientific computing constrains robotics research. Existing studies reveal that up to 70% of robotics algorithms cannot be reproduced by independent teams, while many others fail to reach deployment because…

Throughout computer history, it has been repeatedly demonstrated that critical software vulnerabilities can significantly affect the components involved. In the Free/Libre and Open Source Software (FLOSS) ecosystem, most software is…

Software Engineering · Computer Science 2025-02-13 Stefan Tatschner , Michael P. Heinl , Nicole Pappler , Tobias Specht , Sven Plaga , Thomas Newe

Studies over the past decade demonstrated that developers contributing to open source software systems tend to self-organize in "emerging" communities. This latent community structure has a significant impact on software quality. While…

Software Engineering · Computer Science 2021-04-09 Usman Ashraf , Christoph Mayr-Dorn , Atif Mashkoor , Alexander Egyed , Sebastiano Panichella

The Maven Central ecosystem forms the backbone of Java dependency management, hosting artifacts that vary significantly in their adoption, security, and ecosystem roles. Artifact reuse is fundamental in software development, with ecosystems…

Software Engineering · Computer Science 2025-04-17 Mehedi Hasan Shanto , Muhammad Asaduzzaman , Manishankar Mondal , Shaiful Chowdhury

R and Python are among the most popular languages used in many critical data analytics tasks. However, we still do not fully understand the capabilities of these two languages w.r.t. bugs encountered in data analytics tasks. What type of…

Software Engineering · Computer Science 2023-06-16 Shibbir Ahmed , Mohammad Wardat , Hamid Bagheri , Breno Dantas Cruz , Hridesh Rajan

AI coding agents increasingly modify real software repositories and make dependency decisions, including adding, removing, or updating third-party packages. These choices can materially affect security posture and maintenance burden, yet…

Software Engineering · Computer Science 2026-02-02 Tanmay Singla , Berk Çakar , Paschal C. Amusuo , James C. Davis
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