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Mobility restrictions - travel advisories, trade and travel bans, border closures and, in extreme cases, area quarantines or cordons sanitaires - are among the most widely used measures to control infectious diseases. Restrictions of this…

Populations and Evolution · Quantitative Biology 2020-09-09 Baltazar Espinoza , Carlos Castillo-Chavez , Charles Perrings

We study the problem of parameter estimation based on infection data from an epidemic outbreak on a graph. We assume that successive infections occur via contagion; i.e., transmissions can only spread across existing directed edges in the…

Statistics Theory · Mathematics 2018-06-15 Justin Khim , Po-Ling Loh

Coalescent models are used to study the transmission dynamics of rapidly evolving pathogens from molecular sequence data obtained from infected individuals. However coalescent parameters, such as effective population size, offer limited…

Methodology · Statistics 2025-11-14 Isaac H. Goldstein , Julia A. Palacios

Epidemics like Covid-19 and Ebola have impacted people's lives significantly. The impact of mobility of people across the countries or states in the spread of epidemics has been significant. The spread of disease due to factors local to the…

Populations and Evolution · Quantitative Biology 2022-05-04 Nirmal Kumar Sivaraman , Manas Gaur , Shivansh Baijal , Sakthi Balan Muthiah , Amit Sheth

Nowadays, social media is the main tool in our new lives. The outbreak news and all related obtained from social media, and mob events affect the of spread these news fast. Recently, epidemiological models to study disease spread and…

Social and Information Networks · Computer Science 2025-04-22 Jumana H. S. Alkhalissi , Ahmed Al-Taweel

The movie Ben-Hur highlights the dynamics of contagion associated with leprosy, a pattern of forced aggregation driven by the emergence of symptoms and the fear of contagion. The 2014 Ebola outbreaks reaffirmed the dynamics of…

Populations and Evolution · Quantitative Biology 2015-11-05 Kamuela E. Yong , Edgar Díaz Herrera , Carlos Castillo-Chavez

Influenza remains a significant burden on health systems. Effective responses rely on the timely understanding of the magnitude and the evolution of an outbreak. For monitoring purposes, data on severe cases of influenza in England are…

Epidemics are emergent phenomena depending on the epidemiological characteristics of pathogens and the interaction and movement of people. Public transit systems have provided much important information about the movement of people, but…

Social and Information Networks · Computer Science 2018-09-24 Zhanwei Du , Chao Gao , Yuan Bai , Yongjian Yang , Petter Holme

Dynamic models - often deterministic in nature - were used to estimate the basic reproductive number, R_0, of the 2014-5 Ebola virus disease (EVD) epidemic outbreak in West Africa. Estimates of R_0 were then used to project the likelihood…

Populations and Evolution · Quantitative Biology 2016-01-27 Bradford P Taylor , Jonathan Dushoff , Joshua S Weitz

Multiple instances of Zika virus epidemic have been reported around the world in the last two decades, turning the related illness into an international concern. In this context the use of mathematical models for epidemics is of great…

Populations and Evolution · Quantitative Biology 2021-05-14 Eber Dantas , Michel Tosin , Americo Cunha

The global impact of the COVID-19 pandemic on the livelihoods of people worldwide prompted the implementation of a range of preventive measures at local, national, and international levels. Early in the outbreak, before the vaccine became…

Physics and Society · Physics 2025-01-03 Pranav Verma , Viney Kumar , Samit Bhattacharyya

Mathematical models of epidemiological systems enable investigation of and predictions about potential disease outbreaks. However, commonly used models are often highly simplified representations of incredibly complex systems. Because of…

Populations and Evolution · Quantitative Biology 2023-06-28 Rebecca E. Morrison , Americo Cunha

Recent statistics of malaria shows that over 200 million cases and estimated deaths of nearly half a million occur globally. Africa alone accounts for almost 90% of the cases. Several studies have been conducted to understand the disease…

Populations and Evolution · Quantitative Biology 2020-04-15 Babagana Modu , Nereida Polovina , Savas Konur

Objectives: Our research adopts computational techniques to analyze disease outbreaks weekly over a large geographic area while maintaining local-level analysis by incorporating relevant high-spatial resolution cultural and environmental…

Machine Learning · Computer Science 2024-11-12 Scott Pezanowski , Etien Luc Koua , Joseph C Okeibunor , Abdou Salam Gueye

Existing compartmental models in epidemiology are limited in terms of optimizing the resource allocation to control an epidemic outbreak under disease growth uncertainty. In this study, we address this core limitation by presenting a…

Applications · Statistics 2021-02-24 Xuecheng Yin , I. Esra Buyuktahtakin

As South and Central American countries prepare for increased birth defects from Zika virus outbreaks and plan for mitigation strategies to minimize ongoing and future outbreaks, understanding important characteristics of Zika outbreaks and…

Populations and Evolution · Quantitative Biology 2017-03-01 Deborah P. Shutt , Carrie A. Manore , Stephen Pankavich , Aaron T. Porter , Sara Y. Del Valle

Recent outbreaks of monkeypox and Ebola, and worrying waves of COVID-19, influenza and respiratory syncytial virus, have all led to a sharp increase in the use of epidemiological models to estimate key epidemiological parameters. The…

Populations and Evolution · Quantitative Biology 2023-12-01 B. K. M. Case , Jean-Gabriel Young , Laurent Hébert-Dufresne

Insect-borne diseases are diseases carried by insects affecting humans, animals or plants. They have the potential to generate massive outbreaks such as the Zika epidemic in 2015-2016 mostly distributed in the Americas, the Pacific and…

Analysis of PDEs · Mathematics 2020-02-19 Olivier Martin , Yasmil Fernandez-Diclo , Jerome Coville , Samuel Soubeyrand

Background: A deterministic model is developed for the spatial spread of an epidemic disease in a geographical setting. The disease is borne by vectors to susceptible hosts through criss-cross dynamics. The model is focused on an epidemic…

Populations and Evolution · Quantitative Biology 2016-06-23 W. Fitzgibbon , J. Morgan , G. Webb

We investigate the source detection problem in epidemiology, which is one of the most important issues for control of epidemics. Mathematically, we reformulate the problem as one of identifying the relevant component in a multivariate…

Methodology · Statistics 2021-06-09 Jun Li , Juliane Manitz , Enrico Bertuzzo , Eric D. Kolaczyk