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We present an account of neuroplasticity with respect to cell-internal processing pathways in relation to membrane and synaptic plasticity. We think traditional synapse-centric, weight-based models of memorization are not sufficient or…

Neurons and Cognition · Quantitative Biology 2026-04-27 Gabriele Scheler

Soft composite solids, comprising discrete inclusions embedded within a compliant matrix, are emerging candidates for engineering synthetic tissues and soft robotic materials. Current strategies for controlling their nonlinear mechanics,…

Soft Condensed Matter · Physics 2026-04-23 Yiqiu Zhao , Deng Pan , Yiming Pang , Jonathan Barés , Chang Xu , Che Liu , Haitao Hu , Yuliang Jin , Qin Xu

Disordered fibrous matrices, formed by the random assembly of fibers, provide the structural framework for many biological systems and biomaterials. Applied deformation modifies the alignment and stress states of constituent fibers, tuning…

Soft Condensed Matter · Physics 2025-02-10 Mainak Sarkar , Christina Laukaitis , Amy Wagoner Johnson

Recent investigations of traumatic brain injuries have shown that these injuries can result in conformational changes at the level of individual neurons in the cerebral cortex. Focal axonal swelling is one consequence of such injuries and…

Neurons and Cognition · Quantitative Biology 2023-04-04 Brian L. Frost , Stanislav M. Mintchev

In context of the universal presence of defects in additively manufactured (AM) metals, efficient computational tools are required to rapidly screen AM microstructures for mechanical integrity. To this end, a deep learning approach is used…

Materials Science · Physics 2021-05-25 Brendan P. Croom , Michael Berkson , Robert K. Mueller , Michael Presley , Steven Storck

We study the mechanical and conformational properties of networks of helical polymers with a combination of Monte Carlo simulations based on the Wang-Landau algorithm and the Three-chain Model. We find that the stress-strain behavior of…

Materials Science · Physics 2007-05-23 Gustavo A. Carri , Richard Batman , Vikas Varshney , Taner E. Dirama

Using numerical simulations it is shown that a random, athermal pack of soft frictional grains will store an arbitrary waveform that is applied as a small time-dependent shear while the system is slowly compressed. When the system is…

Soft Condensed Matter · Physics 2026-03-17 Eamon Dwight , D. Candela

Lateral inhibition models coupled with Hebbian plasticity have been shown to learn factorised causal representations of input stimuli, for instance, oriented edges are learned from natural images. Currently, these models require the…

Neurons and Cognition · Quantitative Biology 2025-01-07 Henrique Reis Aguiar , Matthias H. Hennig

Prospective spintronic memory and logic devices will benefit from the negligible stray field and ultrafast magnetic dynamics inherent to antiferromagnets [1]. However, realizing isothermal, nonvolatile, and deterministic switching of…

Motivated by recent experiments showing nonlinear elasticity of in vitro networks of the biopolymer actin cross-linked with filamin, we present an effective medium theory of flexibly cross-linked stiff polymer networks. We model such…

Soft Condensed Matter · Physics 2008-10-19 C. P. Broedersz , C. Storm , F. C. MacKintosh

The evolution of the internal granular structure in shear-arrested and shear-flowing states of granular materials is characterized using fabric tensors as descriptors of the internal contact and force networks. When a dilute system of…

Soft Condensed Matter · Physics 2020-05-20 Ishan Srivastava , Jeremy B. Lechman , Gary S. Grest , Leonardo E. Silbert

The synthetic biopolymeric gels demand a great interest as bio-materials to mimic many biological scaffolding structures, which can contribute to a better understanding of the cytoskeleton-like structural building blocks and soft…

Soft Condensed Matter · Physics 2019-05-01 Horacio Lopez-Menendez , Libardo Gonzalez-Torres

Large-scale force generation is essential for biological functions such as cell motility, embryonic development, and muscle contraction. In these processes, forces generated at the molecular level by motor proteins are transmitted by…

Soft Condensed Matter · Physics 2016-04-05 Pierre Ronceray , Chase Broedersz , Martin Lenz

Living cells inherently reorganize their intracellular structures in response to mechanical cues from their environment. Among these responses, the formation of actin-based stress fibers exhibits a series of structural transitions depending…

Cell Behavior · Quantitative Biology 2026-04-20 Yuika Ueda , Shinji Deguchi

The production of mechanical stresses in living organisms largely relies on localized, force-generating active units embedded in filamentous matrices. Numerical simulations of discrete fiber networks with fixed boundaries have shown that…

Biological Physics · Physics 2018-05-10 Pierre Ronceray , Chase Broedersz , Martin Lenz

Network analysis provides a powerful framework for the interpretation of genome-wide data. While static network approaches have proved fruitful, there is increasing interest in the insights gained from the analysis of cellular networks…

Constitutive modeling lies at the core of mechanics, allowing us to map strains onto stresses for a material in a given mechanical setting. Historically, researchers relied on phenomenological modeling where simple mathematical…

Computational Engineering, Finance, and Science · Computer Science 2024-08-28 Asghar A. Jadoon , Knut A. Meyer , Jan N. Fuhg

Disordered elastic networks are a model material system in which it is possible to achieve tunable and trainable functions. This work investigates the modification of local mechanical properties in disordered networks inspired by allosteric…

Soft Condensed Matter · Physics 2025-01-10 Savannah D. Gowen

This paper introduces Stress-Aware Learning, a resilient neural training paradigm in which deep neural networks dynamically adjust their optimization behavior - whether under stable training regimes or in settings with uncertain dynamics -…

Machine Learning · Computer Science 2025-08-04 Ashkan Shakarami , Yousef Yeganeh , Azade Farshad , Lorenzo Nicole , Stefano Ghidoni , Nassir Navab

We investigate the mechanical interplay between the spatial organization of the actin cytoskeleton and the shape of animal cells adhering on micropillar arrays. Using a combination of analytical work, computer simulations and in vitro…