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Many materials science phenomena, such as growth and self-organisation, are dominated by activated diffusion processes and occur on timescales that are well beyond the reach of standard-molecular dynamics simulations. Kinetic Monte Carlo…

Materials Science · Physics 2009-11-13 fedwa El-Mellouhi , Normand Mousseau , Laurent J. Lewis

Mounting experimental evidence suggests that brain-state-specific neural mechanisms, supported by connectomic architectures, play a crucial role in integrating past and contextual knowledge with the current, incoming flow of evidence (e.g.,…

Human brain achieves dynamic stability-plasticity balance through synaptic homeostasis. Inspired by this biological principle, we propose SPICED: a neuromorphic framework that integrates the synaptic homeostasis mechanism for unsupervised…

Artificial Intelligence · Computer Science 2025-09-23 Yangxuan Zhou , Sha Zhao , Jiquan Wang , Haiteng Jiang , Shijian Li , Tao Li , Gang Pan

The significant morphological and distributional variability among subcellular components poses a long-standing challenge for learning-based organelle segmentation models, significantly increasing the risk of biased feature learning.…

Computer Vision and Pattern Recognition · Computer Science 2025-07-24 Bo Fang , Jianan Fan , Dongnan Liu , Hang Chang , Gerald J. Shami , Filip Braet , Weidong Cai

We investigate the optimal power allocation and optimal precoding for a multi-cell-processing (MCP) framework with limited cooperation. In particular, we consider two base stations(BSs) which maximize the achievable rate for two users…

Information Theory · Computer Science 2016-01-12 Samah A. M. Ghanem

Despite significant advances in understanding neuronal development, a fully quantitative framework that integrates intracellular mechanisms with environmental cues during axonal growth remains incomplete. Here, we present a unified…

Neurons and Cognition · Quantitative Biology 2025-05-26 Kyle Cheng , Udathari Kumarasinghe , Cristian Staii

We systematically investigate the entanglement and information dynamics of quasiperiodic systems across their extended, critical, and localized phases, aiming to identify dynamical signatures that can reveal the multifractal spatial…

Disordered Systems and Neural Networks · Physics 2026-05-21 Huaijin Dong , Long Zhang

The clustering of B cell receptor (BCR) molecules and the formation of the protein segregation structure known as the immunological synapse appears to precede antigen (Ag) uptake by B cells. The mature B cell synapse is characterized by a…

Quantitative Methods · Quantitative Biology 2009-11-13 Philippos K. Tsourkas , Nicole Baumgarth , Scott I. Simon , Subhadip Raychaudhuri

The behavior of active matter under confinement poses significant challenges due to the intricate coupling between dynamics near boundaries and those in the bulk. A defining feature of active matter systems is that a substantial portion of…

Analysis of PDEs · Mathematics 2025-08-25 Leonid Berlyand , Spencer Dang , Pierre-Emmanuel Jabin , Mykhailo Potomkin

A pico-ampere sensitive electrochemical sensor signal acquisition chain consisting of a multi-channel bidirectional current-mirror based potentiostat and a multiplexed current-input delta-sigma ($\Delta \Sigma$) ADC is presented.…

Applied Physics · Physics 2020-11-10 Markus Haberler , Inge Siegl , Christoph Steffan , Mario Auer

Chiral active particles (CAPs) are self-propelling particles that break time-reversal symmetry by orbiting or spinning, leading to intriguing behaviors. Here, we examined the dynamics of CAPs moving in 2D lattices of disk obstacles through…

Soft Condensed Matter · Physics 2024-02-20 Chung Wing Chan , Daihui Wu , Kaiyao Qiao , Kin Long Fong , Zhiyu Yang , Yilong Han , Rui Zhang

A fully dynamic three-layer active constrained layer (ACL) beam is modeled for cantilevered boundary conditions by using a thorough variational approach. The Rao-Nakra thin compliant layer assumptions are adopted to model the sandwich…

Analysis of PDEs · Mathematics 2023-06-21 Ahmet Ozkan Ozer

Migrating cells possess intracellular gradients of Rho GTPases, but it is unknown whether these shallow gradients themselves can induce motility. Here we describe a new method to present cells with induced linear gradients of active,…

Successful cell division requires a tight regulation of chromosome motion via the activity of molecular motors. Many of the key players at the origin of the forces generating the movement have been identified, but their spatial and temporal…

Subcellular Processes · Quantitative Biology 2009-11-11 Otger Campas , Pierre Sens

Cell polarization requires redistribution of specific proteins to the nascent front and back of a eukarytotic cell. Among these proteins are Rac and Rho, members of the small GTPase family that regulate the actin cytoskeleton. Rac promotes…

Cell Behavior · Quantitative Biology 2019-08-29 Andreas Buttenschön , Yue Liu , Leah Edelstein-Keshet

Biomolecular condensates help organize the cell cytoplasm and nucleoplasm into spatial compartments with different chemical compositions. A key feature of such compositional patterning is the local enrichment of enzymatically active…

Biological Physics · Physics 2024-08-06 Andriy Goychuk , Leonardo Demarchi , Ivan Maryshev , Erwin Frey

A novel mechanism for cell differentiation is proposed, based on the dynamic clustering in a globally coupled chaotic system. A simple model with metabolic reaction, active transport of chemicals from media, and cell division is found to…

adap-org · Physics 2009-10-22 Kunihiko Kaneko , Tetsuya Yomo

We consider here a single-compartment model of these neurons which is capable of describing many of the known features of spike generation, particularly the slow rhythmic pacemaking activity often observed in these cells in a variety of…

Neurons and Cognition · Quantitative Biology 2012-12-06 Henry C. Tuckwell , Nicholas J. Penington

Multi-cell cooperation (MCC) is an approach for mitigating inter-cell interference in dense cellular networks. Existing studies on MCC performance typically rely on either over-simplified Wyner-type models or complex system-level…

Information Theory · Computer Science 2012-12-07 Kaibin Huang , Jeffrey G. Andrews

Robust self-organization of subcellular structures is a key principle governing the dynamics and evolution of cellular life. In fission yeast cells undergoing division, the mitotic spindle spontaneously emerges from the interaction of…

Soft Condensed Matter · Physics 2024-06-03 David A. Head , W. J. Briels , Gerhard Gompper
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