English
Related papers

Related papers: A Mathematical Framework for Kinetochore-Driven Ac…

200 papers

This work models a secure integrated sensing and communication (ISAC) system as a wiretap channel with action-dependent channel states and channel output feedback, e.g., obtained through reflections. The transmitted message is split into a…

Information Theory · Computer Science 2024-08-27 Truman Welling , Onur Günlü , Aylin Yener

In this technical note we calculate the dynamics of a linear feedback model of progression in the cell cycle in the case that the cells are organized into k=3 clusters. We examine the dynamics in detail for a specific subset of parameters…

Dynamical Systems · Mathematics 2011-05-16 Bastien Fernandez , Todd R. Young

The spatial structure of the cell is highly organized at all levels: from small complexes and assemblies, to local nano- and micro-clusters, to global, micrometer scales across and between cells. We suggest that this multiscale spatial cell…

Biomolecules · Quantitative Biology 2013-08-06 Ruth Nussinov

Computational models have become an essential part of exploratory protocols in cell biology, as a complement to in vivo or in vitro experiments. These virtual models have the twofold advantage of enabling access to new types of data and…

Medical Physics · Physics 2021-12-20 Maxime Vassaux , Laurent Pieuchot , Karine Anselme , Maxence Bigerelle , Jean-Louis Milan

Contact inhibition plays a crucial role in the motility of cells, the process of wound healing, and the formation of tumors. By mimicking the mechanical motion of calls crawling on a substrate using a pseudopod, we constructed a minimal…

Soft Condensed Matter · Physics 2016-11-28 Simon Kaspar Schnyder , Yuki Tanaka , John Jairo Molina , Ryoichi Yamamoto

Many agent-based mathematical models of cranial neural crest cell (CNCC) migration impose a binary phenotypic partition of cells into either leaders or followers. In such models, the movement of leader cells at the front of collectives is…

Cell Behavior · Quantitative Biology 2026-01-13 Samuel W. S. Johnson , Ruth E. Baker , Philip K. Maini

During early development, waves of activity propagate across the retina and play a key role in the proper wiring of the early visual system. During the stage II these waves are triggered by a transient network of neurons, called Starburst…

Neurons and Cognition · Quantitative Biology 2018-12-19 Dora Matzakou-Karvouniari , Lionel Gil , Elaine Orendorff , Olivier Marre , Serge Picaud , Bruno Cessac

A new cellular automaton (CA) model is presented for the self-organized criticality (SOC) in recurrent bursts of soft gamma repeaters (SGRs), which are interpreted as avalanches of reconnection in the magnetosphere of neutron stars. The…

High Energy Astrophysical Phenomena · Physics 2014-08-25 Ken'ichiro Nakazato

In this paper, a self-adaptive contractive (SAC) algorithm is proposed for enhanced dynamic phasor estimation in the diverse operating conditions of modern power systems. At a high-level, the method is composed of three stages: parameter…

Signal Processing · Electrical Eng. & Systems 2019-05-01 Francisco Messina , Pablo Marchi , Leonardo Rey Vega , Cecilia Galarza

Interconvertible enzyme cascades, exemplified by the mitogen activated protein kinase (MAPK) cascade, are a frequent mechanism in signal transduction pathways. There has been much speculation as to the role of these pathways, and how their…

Molecular Networks · Quantitative Biology 2007-10-30 Herbert M Sauro , Brian Ingalls

Various biological phenomena, like cell differentiation and pattern formation in multicellular organisms, are explained using the bifurcation theory. Molecular network motifs like positive feedback and mutual repressor exhibit bifurcation…

Dynamical Systems · Mathematics 2024-11-26 Shikhar Raj , Biplab Bose

The cell cortex, a thin film of active material assembled below the cell membrane, plays a key role in cellular symmetry breaking processes such as cell polarity establishment and cell division. Here, we present a minimal model of the…

Biological Physics · Physics 2019-09-30 Alexander Mietke , V. Jemseena , K. Vijay Kumar , Ivo F. Sbalzarini , Frank Jülicher

The design and engineering of molecular communication (MC) components capable of processing chemical concentration signals is the key to unleashing the potential of MC for interdisciplinary applications. By controlling the signaling pathway…

Information Theory · Computer Science 2023-10-19 Rinrada Jadsadaphongphaibool , Dadi Bi , Yansha Deng

Recently, SyncMap pioneered an approach to learn complex structures from sequences as well as adapt to any changes in underlying structures. This is achieved by using only nonlinear dynamical equations inspired by neuron group behaviors,…

Machine Learning · Computer Science 2023-10-18 Heng Zhang , Danilo Vasconcellos Vargas

Living soft tissues appear to promote the development and maintenance of a preferred mechanical state within a defined tolerance around a so-called set-point. This phenomenon is often referred to as mechanical homeostasis. In contradiction…

Computational Engineering, Finance, and Science · Computer Science 2021-09-23 Jonas F. Eichinger , Maximilian J. Grill , Iman Davoodi Kermani , Roland C. Aydin , Wolfgang A. Wall , Jay D. Humphrey , Christian J. Cyron

Cell cortex contraction is essential for shaping cells, enabling movement, ensuring proper division, maintaining tissue integrity, guiding development, and responding to mechanical signals - all critical for the life and health of…

Biological Physics · Physics 2024-09-05 Emanuel F. Teixeira , Carine P. Beatrici , Heitor C. M. Fernandes , Leonardo G. Brunnet

Spin-orbit coupling (SOC) lifts molecular orbital degeneracy, enabling bi-level electronic platforms suitable for next-generation digital devices. However, common light-atom molecular feedstocks exhibit weak SOC due to the absence of heavy…

Materials Science · Physics 2025-05-07 Zihao Wang , Wan-Lu Li , Shaowei Li

Cell adhesion complexes (CACs), which are activated by ligand binding, play key roles in many cellular functions ranging from cell cycle regulation to mediation of cell extracellular matrix adhesion. Inspired by single molecule pulling…

Biomolecules · Quantitative Biology 2018-04-04 Ngo Min Toan , D. Thirumalai

In existing semantic communication systems for image transmission, some images are generally reconstructed with considerably low quality. As a result, the reliable transmission of each image cannot be guaranteed, bringing significant…

Signal Processing · Electrical Eng. & Systems 2023-06-28 Guangyi Zhang , Qiyu Hu , Yunlong Cai , Guanding Yu

This paper develops a conceptual extension of the Kinetic Theory of Active Particles, building upon the framework introduced in [2]. Living systems cannot be adequately described within classical single-scale paradigms, even when refined.…

Dynamical Systems · Mathematics 2026-04-22 Diletta Burini , Damian A. Knopoff