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This paper presents Deepchecks, a Python library for comprehensively validating machine learning models and data. Our goal is to provide an easy-to-use library comprising of many checks related to various types of issues, such as model…

APIs are central to modern software development, yet composing new APIs from large libraries is difficult due to the exponential search space; traditional component-based synthesis relies on costly exploration and hand-crafted…

Software Engineering · Computer Science 2025-10-01 Hua Zhong , Shan Jiang , Sarfraz Khurshid

The progression of scientific computing resources has enabled the numerical approximation of mathematical models describing complex physical phenomena. A significant portion of researcher time is typically dedicated to the development of…

Mathematical Software · Computer Science 2015-06-22 Paul T. Bauman , Roy H. Stogner

Optimizing software performance through automated code refinement offers a promising avenue for enhancing execution speed and efficiency. Despite recent advancements in LLMs, a significant gap remains in their ability to perform in-depth…

Software Engineering · Computer Science 2025-01-30 Manish Acharya , Yifan Zhang , Kevin Leach , Yu Huang

Python is a particularly appealing language to carry out data analysis, owing in part to its user-friendly character as well as its access to well maintained and powerful libraries like NumPy and SciPy. Still, for the purpose of analyzing…

High Energy Physics - Lattice · Physics 2024-02-01 Luis Altenkort , David Anthony Clarke , Jishnu Goswami , Hauke Sandmeyer

The rapidly evolving landscape of AI and machine learning workloads has widened the gap between high-level domain operations and efficient hardware utilization. Achieving near-peak performance still demands deep hardware expertise-experts…

Machine Learning · Computer Science 2025-11-19 Arun Thangamani , Md Asghar Ahmad Shahid , Adam Siemieniuk , Rolf Morel , Renato Golin , Alexander Heinecke

Automatic research with Large Language Models (LLMs) is rapidly gaining importance, driving the development of increasingly complex workflows involving multi-agent systems, planning, tool usage, code execution, and human-agent interaction…

Computation and Language · Computer Science 2025-10-09 Haofei Yu , Keyang Xuan , Fenghai Li , Kunlun Zhu , Zijie Lei , Jiaxun Zhang , Ziheng Qi , Kyle Richardson , Jiaxuan You

With the advent of AI agents, automatic scientific discovery has become a tenable goal. Many recent works scaffold agentic systems that can perform machine learning research, but don't offer a principled way to train such agents -- and…

Artificial Intelligence · Computer Science 2026-03-19 Ziyang Cai , Harkirat Behl

libact is a Python package designed to make active learning easier for general users. The package not only implements several popular active learning strategies, but also features the active-learning-by-learning meta-algorithm that assists…

Machine Learning · Computer Science 2017-10-03 Yao-Yuan Yang , Shao-Chuan Lee , Yu-An Chung , Tung-En Wu , Si-An Chen , Hsuan-Tien Lin

Emerging tools bring forth fresh approaches to work, and the field of natural science is no different. In natural science, traditional manual, serial, and labour-intensive work is being augmented by automated, parallel, and iterative…

Computation and Language · Computer Science 2023-08-29 Tong Xie , Yuwei Wan , Wei Huang , Zhenyu Yin , Yixuan Liu , Shaozhou Wang , Qingyuan Linghu , Chunyu Kit , Clara Grazian , Wenjie Zhang , Imran Razzak , Bram Hoex

In this paper, we present Coyote C++, a fully automated white-box unit testing tool for C and C++. Whereas existing tools have struggled to realize unit test generation for C++, Coyote C++ is able to produce high coverage results from unit…

Programming Languages · Computer Science 2024-01-05 Sanghoon Rho , Philipp Martens , Seungcheol Shin , Yeoneo Kim

Numerical simulations are ubiquitous in mathematics and computational science. Several industrial and clinical applications entail modeling complex multiphysics systems that evolve over a variety of spatial and temporal scales. This study…

Mathematical Software · Computer Science 2022-11-14 Pasquale Claudio Africa

Objective: Data clustering is a common exploration step in the omics era, notably in genomics and proteomics where many genes or proteins can bequantified from one or more experiments. Bayesian clustering is a powerful algorithm that can…

Quantitative Methods · Quantitative Biology 2022-04-14 Pierre Poulain , Jean-Michel Camadro

Those seeking to reproduce a computational experiment often need to manually look at the code to see how to build necessary libraries, configure parameters, find data, and invoke the experiment; it is not automatic. Automatic…

Software Engineering · Computer Science 2023-07-24 Samuel Grayson , Reed Milewicz , Joshua Teves , Daniel S. Katz , Darko Marinov

With the accelerated development of Industry 4.0, intelligent manufacturing systems increasingly require efficient task allocation and scheduling in multi-robot systems. However, existing methods rely on domain expertise and face challenges…

Artificial Intelligence · Computer Science 2025-03-19 Mingming Peng , Zhendong Chen , Jie Yang , Jin Huang , Zhengqi Shi , Qihao Liu , Xinyu Li , Liang Gao

Awkward Array is a library for performing NumPy-like computations on nested, variable-sized data, enabling array-oriented programming on arbitrary data structures in Python. However, imperative (procedural) solutions can sometimes be easier…

Programming Languages · Computer Science 2023-10-04 Ianna Osborne , Jim Pivarski , Ioana Ifrim , Angus Hollands , Henry Schreiner

Scientific workflow systems are increasingly popular for expressing and executing complex data analysis pipelines over large datasets, as they offer reproducibility, dependability, and scalability of analyses by automatic parallelization on…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-07-09 Mario Sänger , Ninon De Mecquenem , Katarzyna Ewa Lewińska , Vasilis Bountris , Fabian Lehmann , Ulf Leser , Thomas Kosch

This note provides a lightweight tutorial on using Eigen, a C++ template library for linear algebra, to implement statistical and machine learning algorithms. The emphasis is practical rather than methodological: we show how common matrix…

Computation · Statistics 2026-05-22 Seyoung Lee , Kwan-Young Bak

In this paper we present MLaut (Machine Learning AUtomation Toolbox) for the python data science ecosystem. MLaut automates large-scale evaluation and benchmarking of machine learning algorithms on a large number of datasets. MLaut provides…

Machine Learning · Computer Science 2019-01-14 Viktor Kazakov , Franz J. Király

Graph representations of programs are commonly a central element of machine learning for code research. We introduce an open source Python library python_graphs that applies static analysis to construct graph representations of Python…

Machine Learning · Computer Science 2022-08-17 David Bieber , Kensen Shi , Petros Maniatis , Charles Sutton , Vincent Hellendoorn , Daniel Johnson , Daniel Tarlow