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A classic data structure problem is to preprocess a string T of length $n$ so that, given a query $q$, we can quickly find all substrings of T with Hamming distance at most $k$ from the query string. Variants of this problem have seen…

Data Structures and Algorithms · Computer Science 2026-04-03 Jackson Bibbens , Levi Borevitz , Samuel McCauley

Dynamic time warping (DTW) is a robust similarity measure of time series. However, it does not satisfy triangular inequality and has high computational complexity, severely limiting its applications in similarity search on large-scale…

Information Retrieval · Computer Science 2020-02-12 Zhengxin Li

Test-Time Scaling (TTS) improves the reasoning performance of Large Language Models (LLMs) by allocating additional compute during inference. We conduct a structured survey of TTS methods and categorize them into sampling-based,…

Computation and Language · Computer Science 2025-06-06 Ho-Lam Chung , Teng-Yun Hsiao , Hsiao-Ying Huang , Chunerh Cho , Jian-Ren Lin , Zhang Ziwei , Yun-Nung Chen

Let $S$ be a string of length $n$ over an alphabet $\Sigma$ and let $Q$ be a subset of $\Sigma$ of size $q \geq 2$. The 'co-occurrence problem' is to construct a compact data structure that supports the following query: given an integer $w$…

Data Structures and Algorithms · Computer Science 2022-11-11 Philip Bille , Inge Li Gørtz , Tord Stordalen

A Straight-Line Program (SLP) $G$ for a string $T$ is a context-free grammar (CFG) that derives $T$ only, which can be considered as a compressed representation of $T$. In this paper, we show how to encode $G$ in $n \lceil \lg N \rceil + (n…

Data Structures and Algorithms · Computer Science 2026-01-09 Akito Takasaka , Tomohiro I

It is widely assumed that $O(m+\lg \sigma)$ is the best one can do for finding a pattern of length $m$ in a compacted trie storing strings over an alphabet of size $\sigma$, if one insists on linear-size data structures and deterministic…

Data Structures and Algorithms · Computer Science 2013-02-15 Johannes Fischer , Pawel Gawrychowski

Binary jumbled pattern matching asks to preprocess a binary string $S$ in order to answer queries $(i,j)$ which ask for a substring of $S$ that is of length $i$ and has exactly $j$ 1-bits. This problem naturally generalizes to…

Data Structures and Algorithms · Computer Science 2014-07-01 Travis Gagie , Danny Hermelin , Gad M. Landau , Oren Weimann

Large Language Models (LLMs) have achieved remarkable success in natural language processing through strong semantic understanding and generation. However, their black-box nature limits structured and multi-hop reasoning. In contrast,…

Computation and Language · Computer Science 2025-10-27 Guangxin Su , Hanchen Wang , Jianwei Wang , Wenjie Zhang , Ying Zhang , Jian Pei

The observed frequency of the longest proper prefix, the longest proper suffix, and the longest infix of a word $w$ in a given sequence $x$ can be used for classifying $w$ as avoided or overabundant. The definitions used for the expectation…

We resolve the randomized one-way communication complexity of Dynamic Time Warping (DTW) distance. We show that there is an efficient one-way communication protocol using $\widetilde{O}(n/\alpha)$ bits for the problem of computing an…

Data Structures and Algorithms · Computer Science 2019-03-11 Vladimir Braverman , Moses Charikar , William Kuszmaul , David P. Woodruff , Lin F. Yang

We explore an extension to straight-line programs (SLPs) that outperforms, for some text families, the measure $\delta$ based on substring complexity, a lower bound for most measures and compressors exploiting repetitiveness (which are…

Data Structures and Algorithms · Computer Science 2024-02-16 Gonzalo Navarro , Cristian Urbina

In this paper we study the adaptive prefix coding problem in cases where the size of the input alphabet is large. We present an online prefix coding algorithm that uses $O(\sigma^{1 / \lambda + \epsilon}) $ bits of space for any constants…

Data Structures and Algorithms · Computer Science 2008-11-24 Travis Gagie , Marek Karpinski , Yakov Nekrich

Word embeddings are a powerful approach for analyzing language and have been widely popular in numerous tasks in information retrieval and text mining. Training embeddings over huge corpora is computationally expensive because the input is…

Machine Learning · Computer Science 2018-12-11 Avishek Anand , Megha Khosla , Jaspreet Singh , Jan-Hendrik Zab , Zijian Zhang

Indexing highly repetitive collections has become a relevant problem with the emergence of large repositories of versioned documents, among other applications. These collections may reach huge sizes, but are formed mostly of documents that…

Information Retrieval · Computer Science 2016-05-25 Francisco Claude , Antonio Fariña , Miguel A. Martínez-Prieto , Gonzalo Navarro

The Lempel-Ziv factorization (LZ77) and the Run-Length encoded Burrows-Wheeler Transform (RLBWT) are two important tools in text compression and indexing, being their sizes $z$ and $r$ closely related to the amount of text…

Data Structures and Algorithms · Computer Science 2017-02-07 Alberto Policriti , Nicola Prezza

Combinatory Category Grammar (CCG) supertagging is a task to assign lexical categories to each word in a sentence. Almost all previous methods use fixed context window sizes as input features. However, it is obvious that different tags…

Computation and Language · Computer Science 2016-10-11 Huijia Wu , Jiajun Zhang , Chengqing Zong

The rapid scaling of large language models (LLMs) exacerbates communication bottlenecks in AI data centers (AIDCs). To overcome this, optical circuit switches (OCS) are increasingly adopted for their superior bandwidth capacity and energy…

Networking and Internet Architecture · Computer Science 2026-05-27 Niangen Ye , Jingya Liu , Guofu Zhu , Weiqiang Sun , Weisheng Hu

The \emph{longest common extension} (\emph{LCE}) problem is to preprocess a given string $w$ of length $n$ so that the length of the longest common prefix between suffixes of $w$ that start at any two given positions is answered quickly. In…

Data Structures and Algorithms · Computer Science 2017-02-27 Yuka Tanimura , Takaaki Nishimoto , Hideo Bannai , Shunsuke Inenaga , Masayuki Takeda

In this paper, we present a new data structure called the packed compact trie (packed c-trie) which stores a set $S$ of $k$ strings of total length $n$ in $n \log\sigma + O(k \log n)$ bits of space and supports fast pattern matching queries…

Data Structures and Algorithms · Computer Science 2017-10-11 Takuya Takagi , Shunsuke Inenaga , Kunihiko Sadakane , Hiroki Arimura

The compression of highly repetitive strings (i.e., strings with many repetitions) has been a central research topic in string processing, and quite a few compression methods for these strings have been proposed thus far. Among them, an…

Data Structures and Algorithms · Computer Science 2022-02-17 Takaaki Nishimoto , Shunsuke Kanda , Yasuo Tabei