Related papers: Phylogenetic complexity of the Kimura 3-parameter …
Jukes-Cantor model is one of the most meaningful statistical models from a biological perspective. We are interested in computing the algebraic degrees for phylogenetic varieties, which we call phylogenetic degrees, associated to the…
A simple graph is called triangular if every edge of it belongs to a triangle. We conjecture that any graphical degree sequence all terms of which are greater than or equal to 4 has a triangular realisation, and establish this conjecture…
To describe external and internal attributes of fundamental fermions, a theory of multi-spinor fields is developed on an algebra, a {\it triplet algebra}, which consists of all the triple-direct-products of Dirac \gamma-matrices. The…
The structural constants of an evolution algebra is given by a quadratic matrix $A$. In this work we establish equivalence between nil, right nilpotent evolution algebras and evolution algebras, which are defined by upper triangular matrix…
Superintegrable systems of 2nd order in 3 dimensions with exactly 3-parameter potentials are intriguing objects. Next to the nondegenerate 4-parameter potential systems they admit the maximum number of symmetry operators but their symmetry…
The rich and varied ways that genetic material can be passed between species has motivated extensive research into the theory of phylogenetic networks. Features that align with biological processes, or with desirable mathematical…
Let S be a K3 surface obtained as triple cover of a quadric branched along a genus 4 curve. Using the relation with cubic fourfolds, we show that S has finite dimensional motive, in the sense of Kimura. We also establish the Kuga-Satake…
The alpha model, a parametrized family of probabilities on cladograms (rooted binary leaf labeled trees), is introduced. This model is Markovian self-similar, deletion-stable (sampling consistent), and passes through the Yule, Uniform and…
We study a natural class of Fermi-Ulam Models that features good hyperbolicity properties and that we call dispersing Fermi-Ulam models. Using tools inspired by the theory of hyperbolic billiards we prove, under very mild complexity…
We embed triangulated categories defined by quivers with potential arising from ideal triangulations of marked bordered surfaces into Fukaya categories of quasi-projective 3-folds associated to meromorphic quadratic differentials. Together…
Phylogenetic comparative analysis is an approach to inferring evolutionary process from a combination of phylogenetic and phenotypic data. The last few years have seen increasingly sophisticated models employed in the evaluation of more and…
In this article, we introduce a relation including ideals of an evolution algebra and hereditary subsets of vertices of its associated graph and establish some properties among them. This relation allows us to determine maximal ideals and…
We construct an explicit algebraic realisation of three fermion generations within a single Clifford algebra, transforming under the full Standard Model $SU(3)_C\times SU(2)_L\times U(1)_Y$ gauge group, in which an intrinsic $S_3$ family…
This work gives a manual for constructing superconformal field theories associated to a family of smooth K3 surfaces. A direct method is not known, but a combination of orbifold techniques with a non-classical duality turns out to yield…
The intersection of a complex plane curve with a small three-sphere surrounding one of its singularities is a non-trivial link. The refined punctual Hilbert schemes of the singularity parameterize subschemes supported at the singular point…
This work classifies three-dimensional simple evolution algebras over arbitrary fields. For this purpose, we use tools such as the associated directed graph, the moduli set, inductive limit group, Zariski topology and the dimension of the…
This is the third in a series of papers constructing explicit examples of special Lagrangian submanifolds in C^m. The previous paper in the series, math.DG/0008155, defined the idea of evolution data, which includes an (m-1)-submanifold P…
There are many different models--both continuous and discrete--used to describe gene mutation fixation. In particular, the Moran process, the Kimura equation and the replicator dynamics are all well known models, that might lead to…
A field model of two-component fermions is described, the consequences of which coincide in the main with primary postulates of the standard model. Such a model can be constructed for 4 generations at the minimum. Peculiarities of the…
Let k=F_q be a finite field of even characteristic. We obtain in this paper a complete classification, up to k-isomorphism, of non singular quartic plane curves defined over k. We find explicit rational normal models and we give closed…