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Assessing the time scale of biological processes using molecular dynamics (MD) simulations with sufficient statistical accuracy is a challenging task, as processes are often rare and/or slow events, which may extend largely beyond the time…

Computational Physics · Physics 2026-02-16 Wouter Vervust , Elias Wils , Sina Safaei , Daniel T. Zhang , An Ghysels

We explore a simple mathematical model of network computation, based on Markov chains. Similar models apply to a broad range of computational phenomena, arising in networks of computers, as well as in genetic, and neural nets, in social…

Information Retrieval · Computer Science 2009-04-18 Dusko Pavlovic

Neural network based data-driven market simulation unveils a new and flexible way of modelling financial time series without imposing assumptions on the underlying stochastic dynamics. Though in this sense generative market simulation is…

Statistical Finance · Quantitative Finance 2020-06-26 Hans Bühler , Blanka Horvath , Terry Lyons , Imanol Perez Arribas , Ben Wood

We study the load distribution in weighted networks by measuring the effective number of optimal paths passing through a given vertex. The optimal path, along which the total cost is minimum, crucially depend on the cost distribution…

Statistical Mechanics · Physics 2009-11-10 K. -I. Goh , J. D. Noh , B. Kahng , D. Kim

Quantifying the contributions, or weights, of comparisons or single studies to the estimates in a network meta-analysis (NMA) is an active area of research. We extend this to the contributions of paths to NMA estimates. We present a general…

We present a sequential Monte Carlo algorithm for Markov chain trajectories with proposals constructed in reverse time, which is advantageous when paths are conditioned to end in a rare set. The reverse time proposal distribution is…

Computation · Statistics 2019-08-13 Jere Koskela , Dario Spano , Paul A. Jenkins

A distributed network is modeled by a graph having $n$ nodes (processors) and diameter $D$. We study the time complexity of approximating {\em weighted} (undirected) shortest paths on distributed networks with a $O(\log n)$ {\em bandwidth…

Data Structures and Algorithms · Computer Science 2014-05-23 Danupon Nanongkai

We present a framework for simulating signal propagation in geometric networks (i.e. networks that can be mapped to geometric graphs in some space) and for developing algorithms that estimate (i.e. map) the state and functional topology of…

Disordered Systems and Neural Networks · Physics 2010-06-23 Marius Buibas , Gabriel A. Silva

Efficient planning and sequence selection are central to intelligence, yet current approaches remain largely incompatible with biological computation. Classical graph algorithms like Dijkstra's or A* require global state and biologically…

Neural and Evolutionary Computing · Computer Science 2026-01-21 Simen Storesund , Kristian Valset Aars , Robin Dietrich , Nicolai Waniek

Substreams refer to the streams of each user in a system. Substream weighting, where the weights determine the prioritization order, can be important in multiple-input multiple-output interference channels. In this letter, a distributed…

Information Theory · Computer Science 2016-11-18 Cenk M. Yetis , Yong Zeng , Kushal Anand , Yong Liang Guan , Erry Gunawan

Compartmental models, especially the Susceptible-Infected-Removed (SIR) model, have long been used to understand the behaviour of various diseases. Allowing parameters, such as the transmission rate, to be time-dependent functions makes it…

Methodology · Statistics 2024-09-27 Son Luu , Edward Susko , Lam Si Tung Ho

We propose a procedure to generate dynamical networks with bursty, possibly repetitive and correlated temporal behaviors. Regarding any weighted directed graph as being composed of the accumulation of paths between its nodes, our…

Physics and Society · Physics 2013-04-10 Alain Barrat , Bastien Fernandez , Kevin K Lin , Lai-Sang Young

In this work, we study the real-time tracking and reconstruction of an information source with the purpose of actuation. A device monitors the state of the information source and transmits status updates to a receiver over a wireless…

Information Theory · Computer Science 2023-02-28 Mehrdad Salimnejad , Marios Kountouris , Nikolaos Pappas

As large graph datasets become increasingly common across many fields, sampling is often needed to reduce the graphs into manageable sizes. This procedure raises critical questions about representativeness as no sample can capture the…

Social and Information Networks · Computer Science 2025-02-25 Alan Zhu , Jiaqi Ma , Qiaozhu Mei

We treat the problem of risk-aware control for stochastic shortest path (SSP) on Markov decision processes (MDP). Typically, expectation is considered for SSP, which however is oblivious to the incurred risk. We present an alternative view,…

Systems and Control · Electrical Eng. & Systems 2022-03-04 Tobias Meggendorfer

Contagious diseases can spread quickly in human populations, either through airborne transmission or if some other spreading vectors are abundantly accessible. They can be particularly devastating if the impact on individuals' health has…

Physics and Society · Physics 2022-07-20 Bram A. Siebert , James P. Gleeson , M. Asllani

Models of epidemics over networks have become popular, as they describe the impact of individual behavior on infection spread. However, they come with high computational complexity, which constitutes a problem in case large-scale scenarios…

Systems and Control · Electrical Eng. & Systems 2026-02-10 Davide Zorzenon , Fabio Molinari , Joerg Raisch

Time-limited states characterise many dynamical processes on networks: disease infected individuals recover after some time, people forget news spreading on social networks, or passengers may not wait forever for a connection. These…

Physics and Society · Physics 2023-06-13 Arash Badie-Modiri , Márton Karsai , Mikko Kivelä

The efficient management of large-scale queueing networks is critical for a variety of sectors, including healthcare, logistics, and customer service, where system performance has profound implications for operational effectiveness and cost…

Methodology · Statistics 2024-02-22 L. Jeff Hong , Yingda Song , Tan Wang

We propose a protocol optimization technique that is applicable to both weighted or unweighted graphs. Our aim is to explore by how much a small variation around the Shortest Path or Optimal Path protocols can enhance protocol performance.…

Physics and Society · Physics 2015-05-19 Jose J. Ramasco , Marta S. de la Lama , Eduardo Lopez , Stefan Boettcher
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