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We study, both with numerical simulations and theoretical methods, a cellular automata model for continuum equations describing growth processes in the presence of an external flux of particles. As a result of local instabilities we find a…

Statistical Mechanics · Physics 2009-10-31 Raffaele Cafiero , Guido Caldarelli

Growth and folding in one-layered model tissue sheets are studied in a stochastic, lattice-free single cell model which considers the discrete cellular structure of the tissue, and a coarse grained analytical approach. The polarity of the…

Statistical Mechanics · Physics 2007-05-23 Dirk Drasdo

Molluscan shells come in various shapes and sizes. Despite this diversity, each species produces a shell with a characteristic shape that is independent of environmental conditions. We seek to understand this robust complexity. We are…

Quantitative Methods · Quantitative Biology 2026-04-27 Huan Liu , Kaushik Bhattacharya

Natural slender structures, such as plant leaves, petals, and tendrils, often exhibit complex three-dimensional (3D) morphologies-including twisting, helical coiling, and saddle-bending-driven by differential growth. The resulting internal…

Soft Condensed Matter · Physics 2025-06-24 Hao Liu , Mingwu Li , Dabiao Liu

Based on a non-equilibrium mechanism for spatial pattern formation we study how position information can be controlled by locally coupled discrete dynamical networks, similar to gene regulation networks of cells in a developing…

Molecular Networks · Quantitative Biology 2009-08-26 Thimo Rohlf , Stefan Bornholdt

Morphoelasticity represents a foundational theory for tracing back growth, remodelling, and morphogenesis, yet crucial challenges persist. A unified growth law -- independent of a priori assumptions about constitutive relations or specified…

Soft Condensed Matter · Physics 2025-07-29 Angelo Rosario Carotenuto , Stefania Palumbo , Arsenio Cutolo , Massimiliano Fraldi

We present a theory of pattern formation in growing domains inspired by biological examples of tissue development. Gradients of signaling molecules regulate growth, while growth changes these graded chemical patterns by dilution and…

Quantifying organism-level phenotypes, such as growth dynamics and biomass accumulation, is fundamental to understanding agronomic traits and optimizing crop production. However, quality growing data of plants at scale is difficult to…

Quantitative Methods · Quantitative Biology 2025-07-10 Adam J Riesselman , Evan M Cofer , Therese LaRue , Wim Meeussen

Many growth processes lead to intriguing stochastic patterns and complex fractal structures which exhibit local scale invariance properties. Such structures can often be described effectively by space-time trajectories of interacting…

Statistical Mechanics · Physics 2013-06-07 Adnan Ali , Robin C. Ball , Stefan Grosskinsky , Ellak Somfai

Morphogenesis is the biological process that causes the emergence and changes of patterns (tissues and organs) in living organisms. It is a robust, self-organising mechanism, governed by Genetic Regulatory Networks (GRN), that hasn't been…

Molecular Networks · Quantitative Biology 2026-03-17 Yuriria Cortes-Poza , J. Rogelio Perez-Buendia

Experimental results on amorphous ZrAlCu thin film growth and the dynamics of the surface morphology as predicted from a minimal nonlinear stochastic deposition equation are analysed and compared. Key points of this study are (i) an…

Condensed Matter · Physics 2009-10-31 M. Raible , S. G. Mayr , S. J. Linz , M. Moske , P. Hänggi , K. Samwer

During the development of an organism, cells must coordinate and organize to generate the correct shape, structure, and spatial patterns of tissues and organs, a process known as morphogenesis. The morphogenesis of embryonic tissues is…

Tissues and Organs · Quantitative Biology 2026-04-28 Adrian Aguirre-Tamaral , Elisa Floris , Bernat Corominas-Murtra

A variational framework is introduced to describe how a surface bends when it is subject to local constraints on its geometry. This framework is applied to describe the patterns of a folded sheet of paper. The unstretchability of paper…

Other Condensed Matter · Physics 2008-01-24 Jemal Guven , Martin Michael Mueller

We propose an evolutionary mechanism of phyllotaxis, regular arrangement of leaves on a plant stem. It is shown that the phyllotactic pattern with the Fibonacci sequence has a selective advantage, for it involves the least number of…

Biological Physics · Physics 2015-03-17 Takuya Okabe

We study those real $\mathcal{C}^\infty$ foliations in complex surfaces whose leaves are holomorphic curves. The main motivation is to try and understand these foliations in neighborhoods of curves: can we expect the space of foliations in…

Complex Variables · Mathematics 2021-05-12 Olivier Thom

Models for fluid deformable surfaces provide valid theories to describe the dynamics of thin fluidic sheets of soft materials. To use such models in morphogenesis and development requires to incorporate active forces. We consider active…

Mathematical Physics · Physics 2024-08-20 Maik Porrmann , Axel Voigt

Coordinated movements of epithelia tissue are linked with active matter processes. We here consider the influence of curvature on the spatiotemporal arrangements and the shapes of the cells. The cells are represented by a multiphase field…

Soft Condensed Matter · Physics 2023-04-18 Lea Happel , Dennis Wenzel , Axel Voigt

Plants solve complex problems without centralized control, relying instead on growth-driven dynamics to sense, navigate, and optimize resource acquisition. This review presents a unified physical framework for understanding plant behavior…

Other Condensed Matter · Physics 2026-04-24 Yasmine Meroz

We investigate how thin sheets of arbitrary shapes morph under the isotropic in-plane expansion of their top surface, which may represent several stimuli such as nonuniform heating, local swelling and differential growth. Inspired by…

Soft Condensed Matter · Physics 2015-11-02 Matteo Pezzulla , Gabriel P. Smith , Paola Nardinocchi , Douglas P. Holmes

The (measure-theoretical) entropy of a diffeomorphism along an expanding invariant foliation is the rate of complexity generated by the diffeomorphism along the leaves of the foliation. We prove that this number varies upper…

Dynamical Systems · Mathematics 2018-12-13 Jiagang Yang
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