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Directed acyclic graphs (DAGs) are directed graphs in which there is no path from a vertex to itself. DAGs are an omnipresent data structure in computer science and the problem of counting the DAGs of given number of vertices and to sample…

Discrete Mathematics · Computer Science 2025-10-03 Martin Pépin , Alfredo Viola

We study directed random graphs (random graphs whose edges are directed) as they evolve in discrete time by the addition of nodes and edges. For two distinct evolution strategies, one that forces the graph to a condition of near acyclicity…

Statistical Mechanics · Physics 2007-05-23 Valmir C. Barbosa , Raul Donangelo , Sergio R. Souza

Various models to quantify the reliability of a network have been studied where certain components of the graph may fail at random and the probability that the remaining graph is connected is the proxy for reliability. In this work we…

Combinatorics · Mathematics 2020-11-24 Maimoonah Ahmed , Ben Cameron

Arising user-centric graph applications such as route planning and personalized social network analysis have initiated a shift of paradigms in modern graph processing systems towards multi-query analysis, i.e., processing multiple graph…

Databases · Computer Science 2018-05-31 Christian Mayer , Ruben Mayer , Jonas Grunert , Kurt Rothermel , Muhammad Adnan Tariq

We study random graph models for directed acyclic graphs, an important class of networks that includes citation networks, food webs, and feed-forward neural networks among others. We propose two specific models, roughly analogous to the…

Physics and Society · Physics 2009-10-16 Brian Karrer , M. E. J. Newman

The paper proposes dynamic parallel algorithms for connectivity and bipartiteness of undirected graphs that require constant time and $O(n^{1/2+\epsilon})$ work on the CRCW PRAM model. The work of these algorithms almost matches the work of…

Data Structures and Algorithms · Computer Science 2023-07-20 Jonas Schmidt , Thomas Schwentick

In directed graphs, a cycle can be seen as a structure that allows its vertices to loop back to themselves, or as a structure that allows pairs of vertices to reach each other through distinct paths. We extend these concepts to temporal…

Computational Complexity · Computer Science 2025-03-05 Davi de Andrade , Júlio Araújo , Allen Ibiapina , Andrea Marino , Jason Schoeters , Ana Silva

In this paper, we present a hybrid graph-drawing algorithm (GDA) for layouting large, naturally-clustered, disconnected graphs. We called it a hybrid algorithm because it is an implementation of a series of already known graph-drawing and…

Graphics · Computer Science 2015-07-13 Toni-Jan Keith P. Monserrat , Jaderick P. Pabico , Eliezer A. Albacea

Graph reachability is the task of understanding whether two distinct points in a graph are interconnected by arcs to which in general a semantic is attached. Reachability has plenty of applications, ranging from motion planning to routing.…

Artificial Intelligence · Computer Science 2025-03-26 Davide Di Pierro , Stephan Mennicke , Stefano Ferilli

Many computational chemistry and molecular simulation workflows can be expressed as graphs. This abstraction is useful to modularize and potentially reuse existing components, as well as provide parallelization and ease reproducibility.…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-09-05 Thomas Löhr , Michele Assante , Michael Dodds , Lili Cao , Mikhail Kabeshov , Jon-Paul Janet , Marco Klähn , Ola Engkvist

A directed graph is semi-transitive if and only if it is acyclic and for any directed path $u_1\rightarrow u_2\rightarrow \cdots \rightarrow u_t$, $t \geq 2$, either there is no edge from $u_1$ to $u_t$ or all edges $u_i\rightarrow u_j$…

Combinatorics · Mathematics 2021-08-13 Kittitat Iamthong , Sergey Kitaev

Directed graphs have asymmetric connections, yet the current graph clustering methodologies cannot identify the potentially global structure of these asymmetries. We give a spectral algorithm called di-sim that builds on a dual measure of…

Machine Learning · Statistics 2015-01-09 Karl Rohe , Tai Qin , Bin Yu

We live in a world increasingly dominated by networks -- communications, social, information, biological etc. A central attribute of many of these networks is that they are dynamic, that is, they exhibit structural changes over time. While…

Networking and Internet Architecture · Computer Science 2010-12-02 Prithwish Basu , Amotz Bar-Noy , Ram Ramanathan , Matthew P. Johnson

In this paper, we initiate the study of the dynamic maintenance of $2$-edge-connectivity relationships in directed graphs. We present an algorithm that can update the $2$-edge-connected blocks of a directed graph with $n$ vertices through a…

Data Structures and Algorithms · Computer Science 2016-07-26 Loukas Georgiadis , Giuseppe F. Italiano , Nikos Parotsidis

In this paper we study the problem of dynamically maintaining graph properties under batches of edge insertions and deletions in the massively parallel model of computation. In this setting, the graph is stored on a number of machines, each…

Data Structures and Algorithms · Computer Science 2019-08-07 David Durfee , Laxman Dhulipala , Janardhan Kulkarni , Richard Peng , Saurabh Sawlani , Xiaorui Sun

Given a directed graph and a source vertex, the fully dynamic single-source reachability problem is to maintain the set of vertices that are reachable from the given vertex, subject to edge deletions and insertions. It is one of the most…

Data Structures and Algorithms · Computer Science 2020-02-04 Kathrin Hanauer , Monika Henzinger , Christian Schulz

Graphs are a ubiquitous data structure in diverse domains such as machine learning, social networks, and data mining. As real-world graphs continue to grow beyond the memory capacity of single machines, out-of-core graph processing systems…

Databases · Computer Science 2025-11-12 Dechuang Chen , Sibo Wang , Qintian Guo

We call a topological ordering of a weighted directed acyclic graph non-negative if the sum of weights on the vertices in any prefix of the ordering is non-negative. We investigate two processes for constructing non-negative topological…

Combinatorics · Mathematics 2016-09-21 Dániel Gerbner , Balázs Keszegh , Cory Palmer , Dömötör Pálvölgyi

We consider the task of estimating a high-dimensional directed acyclic graph, given observations from a linear structural equation model with arbitrary noise distribution. By exploiting properties of common random graphs, we develop a new…

Machine Learning · Statistics 2019-12-30 Arjun Sondhi , Ali Shojaie

Graph embedding algorithms are used to efficiently represent (encode) a graph in a low-dimensional continuous vector space that preserves the most important properties of the graph. One aspect that is often overlooked is whether the graph…

Machine Learning · Computer Science 2020-01-31 Zekarias T. Kefato , Nasrullah Sheikh , Alberto Montresor