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We consider computing the longest palindrome in a text of length $n$ in the streaming model, where the characters arrive one-by-one, and we do not have random access to the input. While computing the answer exactly using sublinear memory is…

Data Structures and Algorithms · Computer Science 2016-04-08 Paweł Gawrychowski , Przemysław Uznański

Let us consider the Multiple String Matching Problem. In this problem, we consider a long string, denoted by $t$, of length $n$. This string is referred to as a text. We also consider a sequence of $m$ strings, denoted by $S$, which we…

Quantum Physics · Physics 2024-11-25 Kamil Khadiev , Danil Serov

The random access problem for compressed strings is to build a data structure that efficiently supports accessing the character in position $i$ of a string given in compressed form. Given a grammar of size $n$ compressing a string of size…

Data Structures and Algorithms · Computer Science 2015-01-27 Patrick Hagge Cording

In many applications, it is necessary to determine the string similarity. Edit distance[WF74] approach is a classic method to determine Field Similarity. A well known dynamic programming algorithm [GUS97] is used to calculate edit distance…

Data Structures and Algorithms · Computer Science 2007-05-23 Qi Xiao Yang , Sung Sam Yuan , Lu Chun , Li Zhao , Sun Peng

Joseph Miller [16] and independently Andre Nies, Frank Stephan and Sebastiaan Terwijn [18] gave a complexity characterization of 2-random sequences in terms of plain Kolmogorov complexity C: they are sequences that have infinitely many…

Information Theory · Computer Science 2013-10-22 Bruno Bauwens

We generalize Karp-Rabin string matching to handle multiple patterns in $\mathcal{O}(n \log n + m)$ time and $\mathcal{O}(s)$ space, where $n$ is the length of the text and $m$ is the total length of the $s$ patterns, returning correct…

Data Structures and Algorithms · Computer Science 2015-09-11 Johannes Fischer , Travis Gagie , Paweł Gawrychowski , Tomasz Kociumaka

We briefly survey some concepts related to empirical entropy -- normal numbers, de Bruijn sequences and Markov processes -- and investigate how well it approximates Kolmogorov complexity. Our results suggest $\ell$th-order empirical entropy…

Information Theory · Computer Science 2007-07-16 Travis Gagie

We suggest necessary conditions of soficness of multidimensional shifts formulated in termsof resource-bounded Kolmogorov complexity. Using this technique we provide examples ofeffective and non-sofic shifts on $\mathbb{Z}^2$ with very low…

Discrete Mathematics · Computer Science 2022-05-24 Julien Destombes , Andrei Romashchenko

Palindromes are important objects in strings which have been extensively studied from combinatorial, algorithmic, and bioinformatics points of views. It is known that the length of the longest palindromic substrings (LPSs) of a given string…

Data Structures and Algorithms · Computer Science 2021-01-11 Mitsuru Funakoshi , Yuto Nakashima , Shunsuke Inenaga , Hideo Bannai , Masayuki Takeda

Suppose an oracle knows a string $S$ that is unknown to us and that we want to determine. The oracle can answer queries of the form "Is $s$ a substring of $S$?". In 1995, Skiena and Sundaram showed that, in the worst case, any algorithm…

Data Structures and Algorithms · Computer Science 2021-10-20 Gabriele Fici , Nicola Prezza , Rossano Venturini

Longest common substring (LCS), longest palindrome substring (LPS), and Ulam distance (UL) are three fundamental string problems that can be classically solved in near linear time. In this work, we present sublinear time quantum algorithms…

Quantum Physics · Physics 2023-12-29 François Le Gall , Saeed Seddighin

The normalized substring complexity $\delta$ of a string is defined as $\max_k \{c[k]/k\}$, where $c[k]$ is the number of \textit{distinct} substrings of length $k$. This simply defined measure has recently attracted attention due to its…

Data Structures and Algorithms · Computer Science 2026-02-17 Gregory Kucherov , Yakov Nekrich

The computational complexity of the Maximum Likelihood decoding algorithm in [1], [2] for orthogonal space-time block codes is smaller than specified.

Information Theory · Computer Science 2009-08-08 Ender Ayanoglu

Several classes of DNR functions are characterized in terms of Kolmogorov complexity. In particular, a set of natural numbers A can wtt-compute a DNR function iff there is a nontrivial recursive lower bound on the Kolmogorov complexity of…

Logic · Mathematics 2014-08-12 Bjørn Kjos-Hanssen , Wolfgang Merkle , Frank Stephan

In this paper we present $LCSk$++: a new metric for measuring the similarity of long strings, and provide an algorithm for its efficient computation. With ever increasing size of strings occuring in practice, e.g. large genomes of plants…

Data Structures and Algorithms · Computer Science 2019-08-27 Filip Pavetić , Goran Žužić , Mile Šikić

Any positive word comprised of random sequence of tokens form a finite alphabet can be reduced (without change of length) using an appropriate size Braid group relationships. Surprisingly the Braid relations dramatically reduce the…

Computational Complexity · Computer Science 2013-08-20 Dara O Shayda

Multilayer networks preserve full information about the different interactions among the constituents of a complex system, and have recently proven quite useful in modelling transportation networks, social circles, and the human brain. A…

Physics and Society · Physics 2020-06-29 Andrea Santoro , Vincenzo Nicosia

Consider a d*n matrix A, with d<n. The problem of solving for x in y=Ax is underdetermined, and has infinitely many solutions (if there are any). Given y, the minimum Kolmogorov complexity solution (MKCS) of the input x is defined to be an…

Information Theory · Computer Science 2016-11-17 David Donoho , Hossein Kakavand , James Mammen

The information in an individual finite object (like a binary string) is commonly measured by its Kolmogorov complexity. One can divide that information into two parts: the information accounting for the useful regularity present in the…

Computational Complexity · Computer Science 2007-05-23 Paul Vitanyi

We consider the Consensus Patterns problem, where, given a set of input strings, one is asked to extract a long-enough pattern which appears (with some errors) in all strings. We prove that this problem is W[1]-hard when parameterized by…

Computational Complexity · Computer Science 2017-02-28 Laurent Bulteau