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We give a new characterization of maximal repetitions (or runs) in strings based on Lyndon words. The characterization leads to a proof of what was known as the "runs" conjecture (Kolpakov \& Kucherov (FOCS '99)), which states that the…

Discrete Mathematics · Computer Science 2018-07-03 Hideo Bannai , Tomohiro I , Shunsuke Inenaga , Yuto Nakashima , Masayuki Takeda , Kazuya Tsuruta

In the trace reconstruction problem, the goal is to reconstruct an unknown string $x$ of length $n$ from multiple traces obtained by passing $x$ through the deletion channel. In the relaxed problem of $approximate$ trace reconstruction, the…

Probability · Mathematics 2021-07-15 Zachary Chase , Yuval Peres

In this note, we first introduce a new problem called the longest common subsequence and substring problem. Let $X$ and $Y$ be two strings over an alphabet $\Sigma$. The longest common subsequence and substring problem for $X$ and $Y$ is to…

Data Structures and Algorithms · Computer Science 2023-08-03 R. Li , J. Deka , K. Deka

The longest square subsequence (LSS) problem consists of computing a longest subsequence of a given string $S$ that is a square, i.e., a longest subsequence of form $XX$ appearing in $S$. It is known that an LSS of a string $S$ of length…

Data Structures and Algorithms · Computer Science 2020-07-30 Takafumi Inoue , Shunsuke Inenaga , Hideo Bannai

In this paper, the construction of finite-length binary sequences whose nonlinear complexity is not less than half of the length is investigated. By characterizing the structure of the sequences, an algorithm is proposed to generate all…

Information Theory · Computer Science 2023-12-27 Sicheng Liang , Xiangyong Zeng , Zibi Xiao , Zhimin Sun

The (prefix-free) Kolmogorov complexity of a finite binary string is the length of the shortest description of the string. This gives rise to some `standard' lowness notions for reals: A is K-trivial if its initial segments have the lowest…

Logic · Mathematics 2014-10-15 Ian Herbert

Squares (fragments of the form $xx$, for some string $x$) are arguably the most natural type of repetition in strings. The basic algorithmic question concerning squares is to check if a given string of length $n$ is square-free, that is,…

Data Structures and Algorithms · Computer Science 2023-03-14 Jonas Ellert , Paweł Gawrychowski , Garance Gourdel

In this paper, we consider two versions of the Text Assembling problem. We are given a sequence of strings $s^1,\dots,s^n$ of total length $L$ that is a dictionary, and a string $t$ of length $m$ that is texts. The first version of the…

Quantum Physics · Physics 2024-04-05 Kamil Khadiev , Carlos Manuel Bosch Machado , Zeyu Chen , Junde Wu

A border of a string is a non-empty proper prefix of the string that is also a suffix. A string is unbordered if it has no border. The longest unbordered factor is a fundamental notion in stringology, closely related to string periodicity.…

Data Structures and Algorithms · Computer Science 2025-07-23 Shoma Sekizaki , Takuya Mieno

This paper is the extended version of On the Complexity of Infinite Advice Strings (ICALP 2018). We investigate a notion of comparison between infinite strings. In a general way, if M is a computation model (e.g. Turing machines) and C a…

Formal Languages and Automata Theory · Computer Science 2018-07-19 Gaëtan Douéneau-Tabot

We revisit the classic combinatorial pattern matching problem of finding a longest common subsequence (LCS). For strings $x$ and $y$ of length $n$, a textbook algorithm solves LCS in time $O(n^2)$, but although much effort has been spent,…

Computational Complexity · Computer Science 2018-03-05 Karl Bringmann , Marvin Künnemann

We establish diverse relationships between the algorithmic (Kolmogorov) complexity of the prefixes of any binary expansion and $\beta$-expansions. These relationships allow to develop intuitions on the complexity behavior of…

Information Theory · Computer Science 2025-05-28 Valentin Abadie , Helmut Boelcskei

In the trace reconstruction problem our goal is to learn an unknown string $x\in \{0,1\}^n$ given independent traces of $x$. A trace is obtained by independently deleting each bit of $x$ with some probability $\delta$ and concatenating the…

Data Structures and Algorithms · Computer Science 2024-12-02 Anders Aamand , Allen Liu , Shyam Narayanan

The 2-LCPS problem, first introduced by Chowdhury et al. [Fundam. Inform., 129(4):329-340, 2014], asks one to compute (the length of) a longest palindromic common subsequence between two given strings $A$ and $B$. We show that the 2-LCPS…

Data Structures and Algorithms · Computer Science 2016-12-23 Shunsuke Inenaga , Heikki Hyyrö

We revisit classic string problems considered in the area of parameterized complexity, and study them through the lens of dynamic data structures. That is, instead of asking for a static algorithm that solves the given instance efficiently,…

Data Structures and Algorithms · Computer Science 2022-05-03 Jędrzej Olkowski , Michał Pilipczuk , Mateusz Rychlicki , Karol Węgrzycki , Anna Zych-Pawlewicz

The rate of randomness (or dimension) of a string $\sigma$ is the ratio $C(\sigma)/|\sigma|$ where $C(\sigma)$ is the Kolmogorov complexity of $\sigma$. While it is known that a single computable transformation cannot increase the rate of…

Logic · Mathematics 2019-11-26 Laurent Bienvenu , Barbara F. Csima , Matthew Harrison-Trainor

We show that for any polynomial $f$ from the integers to the integers, with positive leading coefficient and irreducible over the rationals, if $x$ is large enough then there is a string of $(\log x)(\log\log x)^{1/835}$ consecutive…

Number Theory · Mathematics 2023-11-01 Kevin Ford , Mikhail R. Gabdullin

Sophistication and logical depth are two measures that express how complicated the structure in a string is. Sophistication is defined as the minimal complexity of a computable function that defines a two-part description for the string…

Information Theory · Computer Science 2017-01-30 Luís Antunes , Bruno Bauwens , Andre Souto , Andreia Teixeira

We survey diverse approaches to the notion of information: from Shannon entropy to Kolmogorov complexity. Two of the main applications of Kolmogorov complexity are presented: randomness and classification. The survey is divided in two parts…

Logic in Computer Science · Computer Science 2010-10-20 Marie Ferbus-Zanda , Serge Grigorieff

In 1974 Kolmogorov proposed a non-probabilistic approach to statistics and model selection. Let data be finite binary strings and models be finite sets of binary strings. Consider model classes consisting of models of given maximal…

Computational Complexity · Computer Science 2007-05-23 Nikolai Vereshchagin , Paul Vitanyi
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