Related papers: List approximation for increasing Kolmogorov compl…
Random access to highly compressed strings -- represented by straight-line programs or Lempel-Ziv parses, for example -- is a well-studied topic. Random access to such strings in strongly sublogarithmic time is impossible in the worst case,…
This study investigates whether reoptimization can help in solving the closest substring problem. We are dealing with the following reoptimization scenario. Suppose, we have an optimal l-length closest substring of a given set of sequences…
In this paper we consider two problems concerning string factorisation. Specifically given a string $w$ and an integer $k$ find a factorisation of $w$ where each factor has length bounded by $k$ and has the minimum (the FmD problem) or the…
The m-sophistication of a finite binary string x is introduced as a generalization of some parameter in the proof that complexity of complexity is rare. A probabilistic near sufficient statistic of x is given which length is upper bounded…
We study the problem of cutting a length-$n$ string of positive real numbers into $k$ pieces so that every piece has sum at least $b$. The problem can also be phrased as transforming such a string into a new one by merging adjacent numbers.…
Palindromes are strings that read the same forward and backward. Problems of computing palindromic structures in strings have been studied for many years with a motivation of their application to biology. The longest palindrome problem is…
The ability to find short representations, i.e. to compress data, is crucial for many intelligent systems. We present a theory of incremental compression showing that arbitrary data strings, that can be described by a set of features, can…
Tasks that model the relation between pairs of tokens in a string are a vital part of understanding natural language. Such tasks, in general, require exhaustive pair-wise comparisons of tokens, thus having a quadratic runtime complexity in…
Bauwens, Mahklin, Vereshchagin and Zimand [ECCC TR13-007] and Teutsch [arxiv:1212.6104] have shown that given a string x it is possible to construct in polynomial time a list containing a short description of it. We simplify their technique…
In the usual trace reconstruction problem, the goal is to exactly reconstruct an unknown string of length $n$ after it passes through a deletion channel many times independently, producing a set of traces (i.e., random subsequences of the…
The Binary Jumbled String Matching problem is defined as: Given a string $s$ over $\{a,b\}$ of length $n$ and a query $(x,y)$, with $x,y$ non-negative integers, decide whether $s$ has a substring $t$ with exactly $x$ $a$'s and $y$ $b$'s.…
Suppose that we are given a string $s$ of length $n$ over an alphabet $\{0,1,\ldots,n^{O(1)}\}$ and $\delta$ is the string complexity of $s$, a known compression measure. We describe an index on $s$ with $O(\delta\log\frac{n}{\delta})$…
The classical coding theorem in Kolmogorov complexity states that if an $n$-bit string $x$ is sampled with probability $\delta$ by an algorithm with prefix-free domain then K$(x) \leq \log(1/\delta) + O(1)$. In a recent work, Lu and…
Longest common extension queries (often called longest common prefix queries) constitute a fundamental building block in multiple string algorithms, for example computing runs and approximate pattern matching. We show that a sequence of $q$…
We study the classification problems over string data for hypotheses specified by formulas of monadic second-order logic MSO. The goal is to design learning algorithms that run in time polynomial in the size of the training set,…
A 1976 theorem of Chaitin can be used to show that arbitrarily dense sets of lengths n have a paucity of trivial strings (only a bounded number of strings of length n having trivially low plain Kolmogorov complexities). We use the…
We consider a range of simply stated dynamic data structure problems on strings. An update changes one symbol in the input and a query asks us to compute some function of the pattern of length $m$ and a substring of a longer text. We give…
We provide tight upper and lower bounds on the expected minimum Kolmogorov complexity of binary classifiers that are consistent with labeled samples. The expected size is not more than complexity of the target concept plus the conditional…
D. Krieger and J. Shallit have proved that every real number greater than 1 is a critical exponent of some sequence. We show how this result can be derived from some general statements about sequences whose subsequences have (almost)…
We consider string matching with variable length gaps. Given a string $T$ and a pattern $P$ consisting of strings separated by variable length gaps (arbitrary strings of length in a specified range), the problem is to find all ending…