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We modify the approach of Burton and Toland [Comm. Pure Appl. Math. (2011)] to show the existence of periodic surface water waves with vorticity in order that it becomes suited to a stability analysis. This is achieved by enlarging the…
{\it E. coli} bacteria swim in straight runs interrupted by sudden reorientation events called tumbles. The resulting random walks give rise to density fluctuations that can be derived analytically in the limit of non interacting particles…
We derive a scheme by which to solve the Liouville equation perturbatively in the nonlinearity, which we apply to weakly nonlinear classical field theories. Our solution is a variant of the Prigogine diagrammatic method, and is based on an…
We derive an equation that governs the spatiotemporal dynamics of small amplitude alternans in paced cardiac tissue. We show that a pattern-forming linear instability leads to the spontaneous formation of stationary or traveling waves whose…
We continue our study of chaotic mixing and transport of passive particles in a simple model of a meandering jet flow [Prants, et al, Chaos {\bf 16}, 033117 (2006)]. In the present paper we study and explain phenomenologically a connection…
Microbiology is the science of microbes, particularly bacteria. Many bacteria are motile: they are capable of self-propulsion. Among these, a significant class execute so-called run-and-tumble motion: they follow a fairly straight path for…
This thesis is concerned with dynamics of conservative nonlinear waves on bounded domains. In general, there are two scenarios of evolution. Either the solution behaves in an oscillatory, quasiperiodic manner or the nonlinear effects cause…
Pattern formation often occurs in confined systems, yet how boundaries shape patterning dynamics is unclear. We develop techniques to analyze confinement effects in nonlocal advection-diffusion equations, which generically capture the…
Experiments on particles' motion in living cells show that it is often subdiffusive. This subdiffusion may be due to trapping, percolation-like structures, or viscoelatic behavior of the medium. While the models based on trapping (leading…
Microswimmer suspensions self-organize into complex spatio-temporal flow patterns, including vortex lattices and mesoscale turbulence. Here we explore the consequences for the motion of passive tracers, based on a continuum model for the…
It is common practice to approximate a weakly nonlinear wave equation through a kinetic transport equation, thus raising the issue of controlling the validity of the kinetic limit for a suitable choice of the random initial data. While for…
In this paper the spatial-temporal dynamics of the members of interacting populations is described by nonlinear partial differential equations. We consider the migration as a diffusion process influenced by the changing values of the birth…
The purpose of this paper is to prove that, for a large class of nonlinear evolution equations known as scalar viscous balance laws, the spectral (linear) instability condition of periodic traveling wave solutions implies their orbital…
Adaptive transport networks in biological and physical systems exhibit hierarchical organization, characteristic channel spacing, and robust scaling relations. Existing adaptive network models, formulated on a lattice, successfully…
Travelling wave solutions of reaction-diffusion equations are widely used to model the spatial spread of populations and other phenomena in biology and physics. In this article, we reinterpret the classical variational principle approach…
We consider a free boundary model of epithelial cell migration with logistic growth and nonlinear diffusion induced by mechanical interactions. Using numerical simulations, phase plane and perturbation analysis, we find and analyse…
Pattern formation often occurs in spatially extended physical, biological and chemical systems due to an instability of the homogeneous steady state. The type of the instability usually prescribes the resulting spatio-temporal patterns and…
We study travelling-wave solutions for a reaction-diffusion system arising as a model for host-tissue degradation by bacteria. This system consists of a parabolic equation coupled with an ordinary differential equation. For large values of…
We consider self-propelled particles undergoing run-and-tumble dynamics (as exhibited by E. coli) in one dimension. Building on previous analyses at drift-diffusion level for the one-particle density, we add both interactions and noise,…
This paper is concerned with a lattice dynamical system modeling the evolution of susceptible and infective individuals at discrete niches. We prove the existence of traveling waves connecting the disease-free state to non-trivial leftover…