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The run-and-tumble dynamics of bacteria, as exhibited by \textit{E. coli}, offers a simple experimental realization of non-Brownian, yet diffusive, particles. Here we present some analytic and numerical results for models of the ideal…

Statistical Mechanics · Physics 2009-08-12 J. Tailleur , M. E. Cates

Evolution occurs in populations of reproducing individuals. The structure of a biological population affects which traits evolve. Understanding evolutionary game dynamics in structured populations is difficult. Precise results have been…

Populations and Evolution · Quantitative Biology 2017-08-16 Benjamin Allen , Gabor Lippner , Yu-Ting Chen , Babak Fotouhi , Naghmeh Momeni , Martin A. Nowak , Shing-Tung Yau

Identification and extraction of vortical structures and of waves in a disorganised flow is a mayor challenge in the study of turbulence. We present a study of the spatio-temporal behavior of turbulent flows in the presence of different…

Fluid Dynamics · Physics 2015-11-09 P. Clark di Leoni , P. J. Cobelli , P. D. Mininni

Microbial motion is typically analyzed by simplified models in which trajectories exhibit straight runs (perhaps with added Gaussian noise) followed by random, discrete tumbling events. We present the results of a statistical analysis of…

Biological Physics · Physics 2025-02-20 Taylor Whitney , Thomas Solomon , Kevin Mitchell

Discrete nonlinear systems support a rich variety of localized and extended wave phenomena, with their dynamics sensitively dependent on the symmetries of the underlying interaction forces within the lattice. Odd elasticity, emerging in…

Pattern Formation and Solitons · Physics 2026-05-20 Andrus Giraldo , Stefan Ruschel , Behrooz Yousefzadeh

Traveling waves are commonly observed across the brain. While previous studies have suggested the role of traveling waves in learning, the mechanism is still unclear. We adopted a computational approach to investigate the effect of…

Neurons and Cognition · Quantitative Biology 2021-02-10 Yoshiki Ito , Taro Toyoizumi

We study the traveling wave solutions to a reaction diffusion system modeling the public goods game with altruistic behaviors. The existence of the waves is derived through monotone iteration of a pair of classical upper- and lower…

Analysis of PDEs · Mathematics 2009-09-09 Xiaojie Hou , Wei Feng

We consider networks of dynamical units that evolve in time according to different laws, and are coupled to each other in highly irregular ways. Studying how to steer the dynamics of such systems towards a desired evolution is of great…

Physics and Society · Physics 2020-12-01 Ricardo Gutiérrez , Massimo Materassi , Stefano Focardi , Stefano Boccaletti

We develop the formulation of turbulence in terms of the functional integral over the phase space configurations of the vortex cells. The phase space consists of Clebsch coordinates at the surface of the vortex cells plus the Lagrange…

High Energy Physics - Theory · Physics 2008-02-03 A. A. Migdal

Intracellular protein patterns are described by (nearly) mass-conserving reaction-diffusion systems. While these patterns initially form out of a homogeneous steady state due to the well-understood Turing instability, no general theory…

Pattern Formation and Solitons · Physics 2024-01-11 Henrik Weyer , Fridtjof Brauns , Erwin Frey

The effect of temporal modulation on traveling waves in the flows in two distinct systems of rotating cylinders, both with broken azimuthal symmetry, has been investigated. It is shown that by modulating the control parameter at twice the…

We implement Bayesian model selection and parameter estimation for the case of fractional Brownian motion with measurement noise and a constant drift. The approach is tested on artificial trajectories and shown to make estimates that match…

Data Analysis, Statistics and Probability · Physics 2018-04-05 Jens Krog , Lars H. Jacobsen , Frederik W. Lund , Daniel Wüstner , Michael A. Lomholt

It has been reported that traveling waves propagate periodically and stably in sub-excitable systems driven by noise [Phys. Rev. Lett. \textbf{88}, 138301 (2002)]. As a further investigation, here we observe different types of traveling…

Chaotic Dynamics · Physics 2008-01-17 Fen-Ni Si , Quan-Xing Liu , Jin-Zhong Zhang , Lu-Qun Zhou

In this article, we are interested in a non-monotone system of logistic reaction-diffusion equations. This system of equations models an epidemics where two types of pathogens are competing, and a mutation can change one type into the other…

Analysis of PDEs · Mathematics 2014-12-22 Quentin Griette , Gaël Raoul

We study the modulational dynamics of striped patterns formed in the wake of a planar directional quench. Such quenches, which move across a medium and nucleate pattern-forming instabilities in their wake, have been shown in numerous…

Pattern Formation and Solitons · Physics 2023-08-01 Sierra Dunn , Ryan Goh , Benjamin Krewson

Variety of statistically steady energy spectra in elastic wave turbulence have been reported in numerical simulations, experiments, and theoretical studies. Focusing on the energy levels of the system, we have performed direct numerical…

Chaotic Dynamics · Physics 2013-03-07 Naoto Yokoyama , Masanori Takaoka

A robust energy transfer mechanism is found in nonlinear wave systems, which favours transfers towards modes interacting via non-resonant triads, applicable in meteorology, nonlinear optics and plasma wave turbulence. Transfer efficiency is…

Fluid Dynamics · Physics 2013-09-03 Miguel D. Bustamante , Brenda Quinn

We study travelling waves on a two--dimensional lattice with linear and nonlinear coupling between nearest particles and a periodic nonlinear substrate potential. Such a discrete system can model molecules adsorbed on a substrate crystal…

Pattern Formation and Solitons · Physics 2007-05-23 Michal Feckan , Vassilis M. Rothos

In this paper, we investigate the wave solutions of a stochastic rotating shallow water model. This approximate model provides an interesting simple description of the interplay between waves and random forcing ensuing either from the wind…

Fluid Dynamics · Physics 2023-05-02 Etienne Mémin , Long Li , Noé Lahaye , Gilles Tissot , Bertrand Chapron

Pattern-forming nonequilibrium systems are ubiquitous in nature, from driven quantum matter and biological life forms to atmospheric and interstellar gases. Identifying universal aspects of their far-from-equilibrium dynamics and statistics…

Statistical Mechanics · Physics 2026-03-03 Vili Heinonen , Abel J. Abraham , Jonasz Słomka , Keaton J. Burns , Pedro J. Sáenz , Jörn Dunkel
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