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pyspeckit is a toolkit and library for spectroscopic analysis in Python. We describe the pyspeckit package and highlight some of its capabilities, such as interactively fitting a model to data, akin to the historically widely-used splot…

Instrumentation and Methods for Astrophysics · Physics 2022-06-01 Adam Ginsburg , Vlas Sokolov , Miguel de Val-Borro , Erik Rosolowsky , Jaime E. Pineda , Brigitta M. Sipőcz , Jonathan D. Henshaw

This paper introduces Sparklen, a statistical learning toolkit for Hawkes processes in Python, designed to bring together efficiency and ease of use. The purpose of this package is to provide the Python community with a complete suite of…

Methodology · Statistics 2025-03-31 Romain Edmond Lacoste

We aim to provide a suite of publicly available spectral data reduction software to facilitate rapid scientific outcomes from time-domain observations. For time resolved observations, an automated pipeline frees astronomers from performance…

Instrumentation and Methods for Astrophysics · Physics 2019-12-13 Marco C Lam , Robert J Smith , Iain A Steele

PepSIRF is a command-line, module-based open-source software package that facilitates the analysis of data from highly-multiplexed serology assays (e.g., PepSeq or PhIP-Seq). It has nine separate modules in its current release (v1.5.0):…

Quantitative Methods · Quantitative Biology 2022-07-26 Annabelle M. Brown , Evan Bolyen , Isaiah Raspet , John A. Altin , Jason T. Ladner

scikit-image is an image processing library that implements algorithms and utilities for use in research, education and industry applications. It is released under the liberal "Modified BSD" open source license, provides a well-documented…

This paper describes the design and implementation of Stingray, a library in Python built to perform time series analysis and related tasks on astronomical light curves. Its core functionality comprises a range of Fourier analysis…

Instrumentation and Methods for Astrophysics · Physics 2019-08-12 D. Huppenkothen , M. Bachetti , A. L. Stevens , S. Migliari , P. Balm , O. Hammad , U. M. Khan , H. Mishra , H. Rashid , S. Sharma , R. V. Blanco , E. M. Ribeiro

Spectroscopy is a central pillar of materials characterization, providing useful information on properties like structure, composition, or excited state dynamics of a system. However, many spectroscopic techniques present challenges in…

Materials Science · Physics 2026-04-09 Amalya C. Johnson , Chris Fajardo , Leena Sansguiri , Weike Ye , Steven B. Torrisi

PymePix is a new Python 3 library that provides control and acquisition for the Timepix3-SPIDR hardware. The rich set of data-structures and intuitive routines reduces time and coding effort to quickly configure, acquire, and visualize data…

Low-power event-based analog front-ends (AFE) are a crucial component required to build efficient end-to-end neuromorphic processing systems for edge computing. Although several neuromorphic chips have been developed for implementing…

Hardware Architecture · Computer Science 2023-09-08 Shyam Narayanan , Matteo Cartiglia , Arianna Rubino , Charles Lego , Charlotte Frenkel , Giacomo Indiveri

The increasing adoption of digital health technologies has amplified the need for robust, interoperable solutions to manage complex healthcare data. We present the Spezi Data Pipeline, an open-source Python toolkit designed to streamline…

Fourier features based positional encoding (PE) is commonly used in machine learning tasks that involve learning high-frequency features from low-dimensional inputs, such as 3D view synthesis and time series regression with neural tangent…

Machine Learning · Computer Science 2024-07-18 Chuanhao Sun , Zhihang Yuan , Kai Xu , Luo Mai , N. Siddharth , Shuo Chen , Mahesh K. Marina

Techniques for recording large-scale neuronal spiking activity are developing very fast. This leads to an increasing demand for algorithms capable of analyzing large amounts of experimental spike train data. One of the most crucial and…

Data Analysis, Statistics and Probability · Physics 2015-04-16 Thomas Kreuz , Mario Mulansky , Nebojsa Bozanic

SpeechPy is an open source Python package that contains speech preprocessing techniques, speech features, and important post-processing operations. It provides most frequent used speech features including MFCCs and filterbank energies…

Sound · Computer Science 2018-07-25 Amirsina Torfi

Large Language Models (LLMs) have shown great potential in automating code generation; however, their ability to generate accurate circuit-level SPICE code remains limited due to a lack of hardware-specific knowledge. In this paper, we…

Hardware Architecture · Computer Science 2024-10-29 Deepak Vungarala , Sakila Alam , Arnob Ghosh , Shaahin Angizi

We introduce pymovements: a Python package for analyzing eye-tracking data that follows best practices in software development, including rigorous testing and adherence to coding standards. The package provides functionality for key…

pyscreener is a Python library that seeks to alleviate the challenges of large-scale structure-based design using computational docking. It provides a simple and uniform interface that is agnostic to the backend docking engine with which to…

Quantitative Methods · Quantitative Biology 2022-05-05 David E. Graff , Connor W. Coley

Machine learning has rapidly advanced the design and discovery of new materials with targeted applications in various systems. First-principles calculations and other computer experiments have been integrated into material design pipelines…

Reliable parameter extraction from experimental data is central to quantitative analysis in spectroscopy, diffraction, photoluminescence, chromatography, microscopy, and time-resolved measurements. We present FitED, a Python-based desktop…

Data Analysis, Statistics and Probability · Physics 2026-05-04 Mustafa Mahmoud Aboulsaad

Prompt-based models have demonstrated impressive prompt-following capability at image editing tasks. However, the models still struggle with following detailed editing prompts or performing local edits. Specifically, global image quality…

Graphics · Computer Science 2025-10-20 Kenan Tang , Yanhong Li , Yao Qin

SPARKX is an open-source Python package developed to analyze simulation data from heavy-ion collision experiments. By offering a comprehensive suite of tools, SPARKX simplifies data analysis workflows, supports multiple formats such as…

Data Analysis, Statistics and Probability · Physics 2026-02-02 Nils Sass , Hendrik Roch , Niklas Götz , Renata Krupczak , Carl B. Rosenkvist