Machine Learning · Statistics
DOCKSTRING: easy molecular docking yields better benchmarks for ligand design
Miguel García-Ortegón, Gregor N. C. Simm, Austin J. Tripp, José Miguel Hernández-Lobato +2
2021-11-01
Machine Learning · Computer Science
Neural Network Distiller: A Python Package For DNN Compression Research
Neta Zmora, Guy Jacob, Lev Zlotnik, Bar Elharar +1
2019-10-29
Machine Learning · Computer Science
Dockformer: A transformer-based molecular docking paradigm for large-scale virtual screening
Zhangfan Yang, Junkai Ji, Shan He, Jianqiang Li +4
2024-12-06
Biomolecules · Quantitative Biology
We Should at Least Be Able to Design Molecules That Dock Well
Tobiasz Cieplinski, Tomasz Danel, Sabina Podlewska, Stanislaw Jastrzebski
2023-06-16
Mathematical Software · Computer Science
PyTracer: Automatically profiling numerical instabilities in Python
Yohan Chatelain, Nigel Yong, Gregory Kiar, Tristan Glatard
2024-10-28
Signal Processing · Electrical Eng. & Systems
PySensors: A Python Package for Sparse Sensor Placement
Brian M. de Silva, Krithika Manohar, Emily Clark, Bingni W. Brunton +2
2021-03-01
Distributed, Parallel, and Cluster Computing · Computer Science
Containers for portable, productive and performant scientific computing
Jack S. Hale, Lizao Li, Chris N. Richardson, Garth N. Wells
2017-06-19
Quantitative Methods · Quantitative Biology
ProDock: From multi-target consensus docking into database-backed storage
Tieu-Long Phan, Lai Hoang Son Le, Thanh-An Pham, Nhu-Ngoc Nguyen Song +2
2026-04-24
Distributed, Parallel, and Cluster Computing · Computer Science
Building a Virtual HPC Cluster with Auto Scaling by the Docker
Hsi-En Yu, Weicheng Huang
2015-09-29
Distributed, Parallel, and Cluster Computing · Computer Science
Accelerating Python Applications with Dask and ProxyStore
J. Gregory Pauloski, Klaudiusz Rydzy, Valerie Hayot-Sasson, Ian Foster +1
2024-10-18
Distributed, Parallel, and Cluster Computing · Computer Science
Landscape of High-performance Python to Develop Data Science and Machine Learning Applications
Oscar Castro, Pierrick Bruneau, Jean-Sébastien Sottet, Dario Torregrossa
2023-08-24
Mathematical Software · Computer Science
pyGinkgo: A Sparse Linear Algebra Operator Framework for Python
Keshvi Tuteja, Gregor Olenik, Roman Mishchuk, Yu-Hsiang Tsai +4
2025-10-10
Distributed, Parallel, and Cluster Computing · Computer Science
libEnsemble: A Library to Coordinate the Concurrent Evaluation of Dynamic Ensembles of Calculations
Stephen Hudson, Jeffrey Larson, John-Luke Navarro, Stefan M. Wild
2021-06-28
Computer Vision and Pattern Recognition · Computer Science
Scanner: Efficient Video Analysis at Scale
Alex Poms, Will Crichton, Pat Hanrahan, Kayvon Fatahalian
2018-05-21
Information Retrieval · Computer Science
Pyserini: An Easy-to-Use Python Toolkit to Support Replicable IR Research with Sparse and Dense Representations
Jimmy Lin, Xueguang Ma, Sheng-Chieh Lin, Jheng-Hong Yang +2
2021-02-22
Computational Engineering, Finance, and Science · Computer Science
PRCpy: A Python Package for Processing of Physical Reservoir Computing
Harry Youel, Daniel Prestwood, Oscar Lee, Tianyi Wei +5
2024-10-25