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In this paper we investigate the computational power of the polygonal tile assembly model (polygonal TAM) at temperature 1, i.e. in non-cooperative systems. The polygonal TAM is an extension of Winfree's abstract tile assembly model (aTAM)…

Computational Geometry · Computer Science 2015-08-20 Oscar Gilbert , Jacob Hendricks , Matthew J. Patitz , Trent A. Rogers

In this work we consider the inverse problem of finding guiding pattern shapes that result in desired self-assembly morphologies of block copolymer melts. Specifically, we model polymer self-assembly using Self-Consistent Field Theory and…

Soft Condensed Matter · Physics 2021-12-20 Daniil Bochkov , Frederic Gibou

We study a statistical ensemble of a single polymer with self gravitational interaction. This is a model of a gravitating string --- the precursor of a black hole. We analyze averaged sizes by mean field approximations with an effective…

High Energy Physics - Theory · Physics 2015-12-23 Shoichi Kawamoto , Toshihiro Matsuo

We consider the simplest representative of the class of multiply branched polymer macromolecules, known as a pom-pom structure. The molecule consists of a backbone linear chain terminated by two branching points with functionalities…

Soft Condensed Matter · Physics 2020-12-02 Khristine Haydukivska , Ostap Kalyuzhnyi , Viktoria Blavatska , Jaroslav Ilnytskyi

In this paper, we study the problem of shape-programming of incompressible hyperelastic shells through differential growth. The aim of the current work is to determine the growth tensor (or growth functions) that can produce the deformation…

Numerical Analysis · Mathematics 2022-10-13 Zhanfeng Li , Jiong Wang , Mokarram Hossain , Chennakesava Kadapa

We analyze the one-dimensional (1D) and the two-dimensional (2D) repulsive Hubbard models (HM) for densities slightly away from half-filling through the behavior of two central quantities of a system: the uniform charge and spin…

Strongly Correlated Electrons · Physics 2009-11-11 Hermann Freire , Eberth Correa , Alvaro Ferraz

We investigate the mechanical properties of a static dense granular assembly in response to a local forcing. To this end, a small cyclic displacement is applied on a grain in the bulk of a 2D disordered packing under gravity and the…

Soft Condensed Matter · Physics 2009-11-10 E. Kolb , J. Cviklinski , J. Lanuza , P. Claudin , E. Clement

We propose an adaptive form of frameless rendering with the potential to dramatically increase rendering speed over conventional interactive rendering approaches. Without the rigid sampling patterns of framed renderers, sampling and…

Graphics · Computer Science 2025-10-21 Abhinav Dayal , Cliff Woolley , Benjamin Watson , David Luebke

Self-assembly in natural and synthetic molecular systems can create complex aggregates or materials whose properties and functionality rises from their internal structure and molecular arrangement. The key microscopic features that control…

Soft Condensed Matter · Physics 2021-09-03 Alberto Scacchi , Maria Sammalkorpi , Tapio Ala-Nissila

We report on self-assemblies formed from spherical patchy particles interacting by a long-range attraction through a patch region in a two-dimensional system. We performed Monte Carlo simulations to find stable structures in a system with…

Soft Condensed Matter · Physics 2019-09-05 Masahide Sato

We present a recursive construction of a (2t + 1)-wise uniform set of permutations on 2n objects using a (2t + 1) - (2n, n, \cdot) combinatorial design, a t-wise uniform set of permutations on n objects and a (2t+1)-wise uniform set of…

Combinatorics · Mathematics 2017-03-14 Hilary Finucane , Ron Peled , Yariv Yaari

Understanding and controlling the shape of thin, soft objects has been the focus of significant research efforts among physicists, biologists, and engineers in the last decade. These studies aim to utilize advanced materials in novel,…

Soft Condensed Matter · Physics 2015-06-02 Matteo Pezzulla , Steven A. Shillig , Paola Nardinocchi , Douglas P. Holmes

We study the power of uncontrolled random molecular movement in the nubot model of self-assembly. The nubot model is an asynchronous nondeterministic cellular automaton augmented with rigid-body movement rules (push/pull, deterministically…

Data Structures and Algorithms · Computer Science 2014-09-18 Ho-Lin Chen , David Doty , Dhiraj Holden , Chris Thachuk , Damien Woods , Chun-Tao Yang

Manually authoring 3D shapes is difficult and time consuming; generative models of 3D shapes offer compelling alternatives. Procedural representations are one such possibility: they offer high-quality and editable results but are difficult…

Three-dimensional self-assembly of lithographically patterned ultrathin films opens a path to manufacture microelectronic architectures with functionalities and integration schemes not accessible by conventional two-dimensional…

The cytoplasm is a heterogeneous mixture containing many types of proteins that self-assemble into a wide variety of complexes. The accuracy and speed of cytoplasmic self-assembly is astonishing because it involves the correct…

Statistical Mechanics · Physics 2025-11-21 Félix Benoist , Pablo Sartori

Self-assembly processes provide the means to achieve scalable and versatile metamaterials by "bottom-up" fabrication. Despite their enormous potential, especially as a platform for energy materials, self-assembled metamaterials are often…

Applied Physics · Physics 2023-03-09 Jelena Wohlwend , Georg Haberfehlner , Henning Galinski

We explore the use of templated self-assembly to facilitate the formation of complex target structures made from patchy particles. First, we consider the templating of high-symmetry shell structures around a spherical core particle. We find…

Soft Condensed Matter · Physics 2013-06-25 Alexander J. Williamson , Alex W. Wilber , Jonathan P. K. Doye , Ard A. Louis

While autoregressive models have advanced 3D generation, creating physically stable brick structures remains a challenge due to the strict requirements of gravity and interconnectivity. Existing approaches rely on external physical…

Machine Learning · Computer Science 2026-05-11 Chenhui Xu , Ziyue Bai , Fuxun Yu , Heng Huang , Jinjun Xiong

We consider the problem of approximating a two-dimensional shape contour (or curve segment) using discrete assembly systems, which allow to build geometric structures based on limited sets of node and edge types subject to edge length and…

Computational Geometry · Computer Science 2021-02-03 Andreas M. Tillmann , Leif Kobbelt