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The seasonal human influenza virus undergoes rapid evolution, leading to significant changes in circulating viral strains from year to year. These changes are typically driven by adaptive mutations, particularly in the antigenic epitopes,…

Populations and Evolution · Quantitative Biology 2024-11-28 Matthijs Meijers , Denis Ruchnewitz , Jan Eberhardt , Malancha Karmakar , Marta Łuksza , Michael Lässig

While conducting probabilistic surveys is the gold standard for assessing vaccine coverage, implementing these surveys poses challenges for global health. There is a need for more convenient option that is more affordable and practical.…

Applications · Statistics 2026-03-30 Nathaniel Dyrkton , Shomoita Alam , Susan Shepherd , Ibrahim Sana , Kevin Phelan , Jay JH Park

India's mass vaccination efforts have been slow due to high levels of vaccine hesitancy. This study uses data from an online discrete choice experiment with 1371 respondents to rigorously examine the factors shaping vaccine preference in…

Physics and Society · Physics 2021-08-19 Prateek Bansal , Alok Raj , Dhirendra Mani Shukla , Naveen Sunder

Efficient coverage for newly developed vaccines requires knowing which groups of individuals will accept the vaccine immediately and which will take longer to accept or never accept. Of those who may eventually accept the vaccine, there are…

Populations and Evolution · Quantitative Biology 2024-05-13 Azadeh Aghaeeyan , Pouria Ramazi , Mark A. Lewis

The COVID-19 pandemic has adversely affected US public health, resulting in over a hundred million cases and more than one million deaths. Vaccination is the key intervention against the COVID-19 pandemic. Multiple COVID-19 vaccines are now…

Applications · Statistics 2025-02-25 Asim K. Dey

With reference to a binary outcome and a binary mediator, we derive identification bounds for natural effects under a reduced set of assumptions. Specifically, no assumptions about confounding are made that involve the outcome; we only…

Methodology · Statistics 2026-04-03 Marco Doretti , Elena Stanghellini

COVID-19 has been prevalent worldwide for about 2 years now and has brought unprecedented challenges to our society. Before vaccines were available, the main disease intervention strategies were non-pharmaceutical. Starting December 2020,…

Dynamical Systems · Mathematics 2022-02-09 Xiaoying Wang , Qing Han , Jude Dzevela Kong

Causal mediation analysis has become an important and increasingly used framework for evaluating candidate immune response biomarkers in vaccine research. A controlled effects approach has been proposed to estimate controlled risk curves…

Methodology · Statistics 2026-04-09 Qijia He , Bo Zhang

Vaccines have proven effective in mitigating the threat of severe infections and deaths during outbreaks of infectious diseases. However, vaccine hesitancy (VH) complicates disease spread prediction and healthcare resource assessment across…

Optimization and Control · Mathematics 2024-05-10 Hieu Bui , Sandra Eksioglu , Ruben Proano , Haoming Shen

Vaccination is an effective way to prevent and control the occurrence and epidemic of infectious diseases. However, many factors influence whether the residents decide to get vaccinated or not, such as the efficacy and side effects while…

Physics and Society · Physics 2022-03-09 Yingyue Ke , Jin Zhou

Suppose one has data from one or more completed vaccine efficacy trials and wishes to estimate the efficacy in a new setting. Often logistical or ethical considerations make running another efficacy trial impossible. Fortunately, if there…

Methodology · Statistics 2017-01-25 Alexander R. Luedtke , Peter B. Gilbert

Highly pathogenic avian influenza A(H5N1) has expanded geographically and ecologically, affecting wild birds, mammalian wildlife, domestic animals, and humans. Wildlife surveillance provides critical early warning for One Health…

Populations and Evolution · Quantitative Biology 2026-05-22 Hammed Olawale Fatoyinbo , Hoyeon Jeong

Miss-information is usually adjusted to fit distinct narratives and can propagate rapidly through communities of interest, which work as echo chambers, cause reinforcement and foster confirmation bias. False beliefs, once adopted, are…

Physics and Society · Physics 2020-09-30 Rafael Prieto Curiel , Humberto González Ramírez

Understanding waning of vaccine-induced protection is important for both immunology and public health. Population heterogeneities in underlying (pre-vaccination) susceptibility and vaccine response can cause measured vaccine effectiveness…

Populations and Evolution · Quantitative Biology 2023-08-02 Ariel Nikas , Hasan Ahmed , Veronika I. Zarnitsyna

Inspired by contagion models of social belief formation, we develop an epistemically-informed modeling framework, SIS-Vo, in which vaccine-related information propagates on a signed opinion network. Our model allows for heterogeneous…

Physics and Society · Physics 2026-05-22 Alessandro Casu , Camilla Quaresmini , Robin Delabays , Lewis Mitchell , Philip E. Paré

Analytical expressions for the basic reproduction number, R0, have been obtained in the past for a wide variety of mathematical models for infectious disease spread, along with expressions for the expected final size of an outbreak.…

Populations and Evolution · Quantitative Biology 2018-12-18 Sherry Towers , Linda J. S. Allen , Fred Brauer , Baltazar Espinoza

Cluster-randomized trials are often conducted to assess vaccine effects. Defining estimands of interest before conducting a trial is integral to the alignment between a study's objectives and the data to be collected and analyzed. This…

Methodology · Statistics 2019-10-10 Kayla W. Kilpatrick , Michael G. Hudgens , M. Elizabeth Halloran

Vaccination policies play a central role in public health interventions and models are often used to assess the effectiveness of these policies. Many vaccines are leaky, in which case the observed vaccine effectiveness depends on the force…

Populations and Evolution · Quantitative Biology 2025-04-21 Gray Manicom , Emily Harvey , Joshua Looker , David Wu , Oliver Maclaren , Dion O' Neale

Using the PreventS trial data, our objective is to estimate average effects of a Health Wellness Coaching (HWC) intervention on improvement of cardiovascular health at 9 months post randomization and in three consecutive 3-month periods…

Methodology · Statistics 2023-03-01 Jinghong Zeng

Vaccination campaigns play a pivotal role in controlling infectious diseases. Their success, however, depends not only on vaccine efficacy and availability but also significantly on public opinion and the willingness of individuals to…

Physics and Society · Physics 2026-03-26 Anika Roy , Ujjwal Shekhar , Subrata Ghosh , Tomasz Kapitaniak , Chittaranjan Hens