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Generative Adversarial Networks (GANs) are Machine Learning (ML) algorithms that have the ability to address competitive resource allocation problems together with detection and mitigation of anomalous behavior. In this paper, we…

Machine Learning · Computer Science 2025-05-15 Ender Ayanoglu , Kemal Davaslioglu , Yalin E. Sagduyu

Numerical simulation is a predominant tool for studying the dynamics in complex systems, but large-scale simulations are often intractable due to computational limitations. Here, we introduce the Neural Graph Simulator (NGS) for simulating…

Machine Learning · Computer Science 2024-11-15 Hoyun Choi , Sungyeop Lee , B. Kahng , Junghyo Jo

The de novo design of molecular structures using deep learning generative models introduces an encouraging solution to drug discovery in the face of the continuously increased cost of new drug development. From the generation of original…

Biomolecules · Quantitative Biology 2021-02-08 Yuemin Bian , Xiang-Qun Xie

We present TensorCircuit-NG, a next-generation quantum software platform designed to bridge the gap between quantum physics, artificial intelligence, and high-performance computing. Moving beyond the scope of traditional circuit simulators,…

Nanopore sequencing, a next-generation sequencing technology, holds the potential to revolutionize multiple facets of life sciences, forensics, and healthcare. While previous research has focused on its technical intricacies and biomedical…

Physics and Society · Physics 2024-10-29 Suadath V , Muhammad Sajeer P

Spiking neural networks, also often referred to as the third generation of neural networks, carry the potential for a massive reduction in memory and energy consumption over traditional, second-generation neural networks. Inspired by the…

Neural and Evolutionary Computing · Computer Science 2022-10-27 Alexander Henkes , Jason K. Eshraghian , Henning Wessels

High-throughput sequencing (HTS) is revolutionizing biological research by enabling scientists to quickly and cheaply query variation at a genomic scale. Despite the increasing ease of obtaining such data, using these data effectively still…

Genomics · Quantitative Biology 2012-11-09 Sonal Singhal

Single-cell technologies have revolutionized biomedical research by enabling scalable measurement of the genome, transcriptome, and proteome of multiple systems at single-cell resolution. Now widely applied to cancer models, these assays…

Genomics · Quantitative Biology 2020-05-05 Allen W Zhang , Kieran R Campbell

Molecular dynamics simulations hold great promise for providing insight into the microscopic behavior of complex molecular systems. However, their effectiveness is often constrained by long timescales associated with rare events. Enhanced…

Computational Physics · Physics 2026-03-03 Kai Zhu , Enrico Trizio , Jintu Zhang , Renling Hu , Linlong Jiang , Tingjun Hou , Luigi Bonati

In the middle of the last century, it has been known that neural stem cells (NSCs) play a key role in regenerative medicine to cure the neurodegenerative disease. This review article covers about the introduction to neural stem cell biology…

Neurons and Cognition · Quantitative Biology 2018-04-06 Divyanjali Shanmuganathan , Nivethika Sivakumaran

The emerging topic of sequential recommender systems has attracted increasing attention in recent years.Different from the conventional recommender systems including collaborative filtering and content-based filtering, SRSs try to…

Information Retrieval · Computer Science 2020-01-15 Shoujin Wang , Liang Hu , Yan Wang , Longbing Cao , Quan Z. Sheng , Mehmet Orgun

Generally, when genetic programming (GP) is used for function synthesis any valuable experience gained by the system is lost from one problem to the next, even when the problems are closely related. With the aim of developing a system which…

Neural and Evolutionary Computing · Computer Science 2015-05-07 Robyn Ffrancon

Neural Networks (NNs) have provided state-of-the-art results for many challenging machine learning tasks such as detection, regression and classification across the domains of computer vision, speech recognition and natural language…

Machine Learning · Statistics 2026-04-21 Ethan Goan , Clinton Fookes

Synthesizing user-intended programs from a small number of input-output examples is a challenging problem with several important applications like spreadsheet manipulation, data wrangling and code refactoring. Existing synthesis systems…

Artificial Intelligence · Computer Science 2018-09-17 Ashwin Kalyan , Abhishek Mohta , Oleksandr Polozov , Dhruv Batra , Prateek Jain , Sumit Gulwani

The standard nature of computing is currently being challenged by a range of problems that start to hinder technological progress. One of the strategies being proposed to address some of these problems is to develop novel brain-inspired…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-06-03 Giacomo Indiveri

There is little debate about the importance of the ancestral recombination graph in population genetics. An important theoretical tool, the main obstacle to its widespread usage is the computational cost required to match the…

Populations and Evolution · Quantitative Biology 2026-05-14 Patrick Fournier , Fabrice Larribe

Genealogy research is the study of family history using available resources such as historical records. Ancestry provides its customers with one of the world's largest online genealogical index with billions of records from a wide range of…

Information Retrieval · Computer Science 2019-03-04 Peng Jiang , Yingrui Yang , Gann Bierner , Fengjie Alex Li , Ruhan Wang , Azadeh Moghtaderi

Expanding genetic codes from natural standard nucleotides to artificial non-standard nucleotides marks a significant advancement in synthetic biology, with profound implications for biotechnology and medicine. Decoding the biological…

Genomics · Quantitative Biology 2024-09-17 Hyunjin Shim

Generative adversarial networks (GANs) are a hot research topic recently. GANs have been widely studied since 2014, and a large number of algorithms have been proposed. However, there is few comprehensive study explaining the connections…

Machine Learning · Computer Science 2020-01-22 Jie Gui , Zhenan Sun , Yonggang Wen , Dacheng Tao , Jieping Ye

Several variations of the Watterson estimator of variability for Next Generation Sequencing (NGS) data have been proposed in the literature. We present a unified framework for generalized Watterson estimators based on Maximum Composite…

Populations and Evolution · Quantitative Biology 2015-09-22 Luca Ferretti , Sebástian E. Ramos-Onsins
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