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As artificial intelligence surpasses human capabilities in text generation, the necessity to authenticate the origins of AI-generated content has become paramount. Unbiased watermarks offer a powerful solution by embedding statistical…

Computation and Language · Computer Science 2025-08-07 Ruibo Chen , Yihan Wu , Junfeng Guo , Heng Huang

Watermarking has emerged as a crucial technique for detecting and attributing content generated by large language models. While recent advancements have utilized watermark ensembles to enhance robustness, prevailing methods typically…

Cryptography and Security · Computer Science 2026-02-13 Ruibo Chen , Yihan Wu , Xuehao Cui , Jingqi Zhang , Heng Huang

We describe a strategy for constructing codes for DNA-based information storage by serial composition of weighted finite-state transducers. The resulting state machines can integrate correction of substitution errors; synchronization by…

Information Theory · Computer Science 2016-11-18 Ian Holmes

Curating high quality datasets that play a key role in the emergence of new AI applications requires considerable time, money, and computational resources. So, effective ownership protection of datasets is becoming critical. Recently, to…

Multimedia · Computer Science 2024-07-19 Saeed Ranjbar Alvar , Mohammad Akbari , David Ming Xuan Yue , Yong Zhang

Consider a large database of $n$ data items that need to be stored using $m$ servers. We study how to encode information so that a large number $k$ of read requests can be performed in parallel while the rate remains constant (and ideally…

Information Theory · Computer Science 2014-10-14 Alexandros G. Dimakis , Anna Gal , Ankit Singh Rawat , Zhao Song

Encoding data as a set of unordered strings is receiving great attention as it captures one of the basic features of DNA storage systems. However, the challenge of constructing optimal redundancy codes for this channel remained elusive. In…

Information Theory · Computer Science 2023-08-16 Jin Sima , Netanel Raviv , Jehoshua Bruck

Crossbar resistive memory with the 1 Selector 1 Resistor (1S1R) structure is attractive for nonvolatile, high-density, and low-latency storage-class memory applications. As technology scales down to the single-nm regime, the increasing…

Systems and Control · Electrical Eng. & Systems 2021-04-30 Zehui Chen , Lara Dolecek

Subsampling of node sets is useful in contexts such as multilevel methods, computer graphics, and machine learning. On uniform grid-based node sets, the process of subsampling is simple. However, on node sets with high density variation,…

Numerical Analysis · Mathematics 2023-05-19 Andrew P. Lawrence , Morten E. Nielsen , Bengt Fornberg

Multiple watermarking technique, embedding several watermarks in one carrier, has enabled many interesting applications. In this study, a novel multiple watermarking algorithm is proposed based on the spirit of spread transform dither…

Multimedia · Computer Science 2016-01-19 Xinchao Li , Ju Liu , Jiande Sun , Xiaohui Yang , Wei Liu

Given a sequence composed of a limit number of characters, we try to "read" it as a "text". This involves to segment the sequence into "words". The difficulty is to distinguish good segmentation from enormous number of random ones.Aiming at…

Biological Physics · Physics 2009-11-06 Bin Wang

This paper introduces a new family of reconstruction codes which is motivated by applications in DNA data storage and sequencing. In such applications, DNA strands are sequenced by reading some subset of their substrings. While previous…

Information Theory · Computer Science 2022-05-10 Yonatan Yehezkeally , Daniella Bar-Lev , Sagi Marcovich , Eitan Yaakobi

Motivation: RNA-seq has made feasible the analysis of a whole set of expressed mRNAs. Mapping-based assembly of RNA-seq reads sometimes is infeasible due to lack of high-quality references. However, de novo assembly is very challenging due…

Genomics · Quantitative Biology 2015-06-19 Qingming Tang , Sheng Wang , Jian Peng , Jianzhu Ma , Jinbo Xu

We propose an imperceptible multi-bit text watermark embedded by paraphrasing with LLMs. We fine-tune a pair of LLM paraphrasers that are designed to behave differently so that their paraphrasing difference reflected in the text semantics…

Artificial Intelligence · Computer Science 2025-06-18 Xiaojun Xu , Jinghan Jia , Yuanshun Yao , Yang Liu , Hang Li

While existing audio watermarking techniques have achieved strong robustness against traditional digital signal processing (DSP) attacks, they remain vulnerable to neural resynthesis. This occurs because modern neural audio codecs act as…

We investigate the concept of deep barcodes and propose two methods to generate them in order to expedite the process of classification and retrieval of histopathology images. Since binary search is computationally less expensive, in terms…

Image and Video Processing · Electrical Eng. & Systems 2018-05-24 Meghana Dinesh Kumar , Morteza Babaie , Hamid Tizhoosh

The design of multi-stable RNA molecules has important applications in biology, medicine, and biotechnology. Synthetic design approaches profit strongly from effective in-silico methods, which can tremendously impact their cost and…

Quantitative Methods · Quantitative Biology 2018-06-24 Stefan Hammer , Yann Ponty , Wei Wang , Sebastian Will

Watermarking plays a key role in the provenance and detection of AI-generated content. While existing methods prioritize robustness against real-world distortions (e.g., JPEG compression and noise addition), we reveal a fundamental…

Computer Vision and Pattern Recognition · Computer Science 2025-02-11 Zhongjie Ba , Yitao Zhang , Peng Cheng , Bin Gong , Xinyu Zhang , Qinglong Wang , Kui Ren

We present the first in depth study on the robustness of existing watermarking techniques applied to code generated by large language models (LLMs). As LLMs increasingly contribute to software development, watermarking has emerged as a…

Cryptography and Security · Computer Science 2025-08-21 Tarun Suresh , Shubham Ugare , Gagandeep Singh , Sasa Misailovic

High throughput mRNA expression profiling can be used to characterize the response of cell culture models to perturbations such as pharmacologic modulators and genetic perturbations. As profiling campaigns expand in scope, it is important…

Genomics · Quantitative Biology 2017-04-12 Tracey Filzen , Peter Kutchukian , Jeffrey Hermes , Jing Li , Matthew Tudor

Digital watermarking technology has a wide range of applications in video distribution and copyright protection due to its excellent invisibility and convenient traceability. This paper proposes a robust blind watermarking algorithm using…

Multimedia · Computer Science 2022-09-28 Qinwei Chang , Leichao Huang , Shaoteng Liu , Hualuo Liu , Tianshu Yang , Yexin Wang