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This paper describes how realistic neuromorphic networks can have their connectivity properties fully characterized in analytical fashion. By assuming that all neurons have the same shape and are regularly distributed along the…

Disordered Systems and Neural Networks · Physics 2009-11-10 Luciano da F. Costa

We propose a statistical framework to identify topological differences in two populations of random geometric objects. The proposed framework involves first associating a topological signature with random geometric objects and then…

Methodology · Statistics 2026-03-17 Satish Kumar , Subhra Sankar Dhar

The structure of real-world networks is usually difficult to characterize owing to the variation of topological scales, the nondyadic complex interactions, and the fluctuations in the network. We aim to address these problems by introducing…

Social and Information Networks · Computer Science 2019-09-25 Quoc Hoan Tran , Van Tuan Vo , Yoshihiko Hasegawa

Classification of large and dense networks based on topology is very difficult due to the computational challenges of extracting meaningful topological features from real-world networks. In this paper we present a computationally tractable…

Machine Learning · Computer Science 2022-02-04 Tananun Songdechakraiwut , Bryan M. Krause , Matthew I. Banks , Kirill V. Nourski , Barry D. Van Veen

A communication network can be modeled as a directed connected graph with edge weights that characterize performance metrics such as loss and delay. Network tomography aims to infer these edge weights from their pathwise versions measured…

Optimization and Control · Mathematics 2019-08-12 Mahmood Ettehad , Nick Duffield , Gregory Berkolaiko

Topological data analysis (TDA), while abstract, allows a characterization of time-series data obtained from nonlinear and complex dynamical systems. Though it is surprising that such an abstract measure of structure - counting pieces and…

Computational Geometry · Computer Science 2020-01-07 Nicole Sanderson , Elliott Shugerman , Samantha Molnar , James D. Meiss , Elizabeth Bradley

Characterizing the loss of a neural network with respect to model parameters, i.e., the loss landscape, can provide valuable insights into properties of that model. Various methods for visualizing loss landscapes have been proposed, but…

Biology presents many examples of planar distribution and structural networks having dense sets of closed loops. An archetype of this form of network organization is the vasculature of dicotyledonous leaves, which showcases a…

Quantitative Methods · Quantitative Biology 2015-05-30 Eleni Katifori , Marcelo O. Magnasco

Seeking effective neural networks is a critical and practical field in deep learning. Besides designing the depth, type of convolution, normalization, and nonlinearities, the topological connectivity of neural networks is also important.…

Computer Vision and Pattern Recognition · Computer Science 2020-08-20 Kun Yuan , Quanquan Li , Jing Shao , Junjie Yan

The overhead of internal network monitoring motivates techniques of network tomography. Network coding (NC) presents a new opportunity for network tomography as NC introduces topology-dependent correlation that can be further exploited in…

Networking and Internet Architecture · Computer Science 2014-03-25 Peng Qin , Bin Dai , Benxiong Huang , Guan Xu , Kui Wu

The structure of grey matter has long been a key focus in neuroscience, as cell morphology varies by type and can be affected by neurological conditions. Understanding these variations is essential for studying brain function and disease.…

Biological Physics · Physics 2025-08-27 Charlie Aird-Rossiter , Hui Zhang , Daniel C. Alexander , Derek K. Jones , Marco Palombo

Topological orders are a prominent paradigm for describing quantum many-body systems without symmetry-breaking orders. We present a topological quantum field theoretical (TQFT) study on topological orders in five-dimensional spacetime…

High Energy Physics - Theory · Physics 2022-04-25 Zhi-Feng Zhang , Peng Ye

Neural network training is commonly based on SGD. However, the understanding of SGD's ability to converge to good local minima, given the non-convex nature of loss functions and the intricate geometric characteristics of loss landscapes,…

In topological data analysis and visualization, topological descriptors such as persistence diagrams, merge trees, contour trees, Reeb graphs, and Morse-Smale complexes play an essential role in capturing the shape of scalar field data. We…

Human-Computer Interaction · Computer Science 2024-06-06 Lin Yan , Talha Bin Masood , Raghavendra Sridharamurthy , Farhan Rasheed , Vijay Natarajan , Ingrid Hotz , Bei Wang

This paper introduces the Neural Differential Manifold (NDM), a novel neural network architecture that explicitly incorporates geometric structure into its fundamental design. Departing from conventional Euclidean parameter spaces, the NDM…

Machine Learning · Computer Science 2025-10-30 Di Zhang

Based on a large dataset containing thousands of real-world networks ranging from genetic, protein interaction, and metabolic networks to brain, language, ecology, and social networks we search for defining structural measures of the…

Machine Learning · Computer Science 2021-06-22 Máté Józsa , Alpár S. Lázár , Zsolt I. Lázár

Topological neural networks (TNNs) are information processing architectures that model representations from data lying over topological spaces (e.g., simplicial or cell complexes) and allow for decentralized implementation through localized…

Information Theory · Computer Science 2025-02-17 Simone Fiorellino , Claudio Battiloro , Paolo Di Lorenzo

Quantifying similarity between neural representations -- e.g. hidden layer activation vectors -- is a perennial problem in deep learning and neuroscience research. Existing methods compare deterministic responses (e.g. artificial networks…

Machine Learning · Computer Science 2023-02-07 Lyndon R. Duong , Jingyang Zhou , Josue Nassar , Jules Berman , Jeroen Olieslagers , Alex H. Williams

We introduce a new framework to analyze shape descriptors that capture the geometric features of an ensemble of point clouds. At the core of our approach is the point of view that the data arises as sampled recordings from a metric…

Statistics Theory · Mathematics 2024-09-11 Anne van Delft , Andrew J. Blumberg

In this study, we present a method of pattern mining based on network theory that enables the identification of protein structures or complexes from synthetic volume densities, without the knowledge of predefined templates or human biases…

Quantitative Methods · Quantitative Biology 2022-10-18 August George , Doo Nam Kim , Trevor Moser , Ian T. Gildea , James E. Evans , Margaret S. Cheung