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Recent experimental investigations into Hydra regeneration revealed a remarkable phenomenon: the morphological transformation of a tissue fragment from the incipient spherical configuration to a tube-like structure - the hallmark of a…

Biological Physics · Physics 2024-05-07 Oded Agam , Erez Braun

We investigate the morphologies of the Ge(001) surface that are produced by bombardment with a normally incident, broad argon ion beam at sample temperatures above the recrystallization temperature. Two previously-observed kinds of…

Many random growth models have the property that the set of discovered sites, scaled properly, converges to some deterministic set as time grows. Such results are known as shape theorems. Typically, not much is known about the shapes. For…

Machine Learning · Statistics 2020-06-26 Sebastian Rosengren

Segregation patterns of size-bidisperse particle mixtures in a fully-three-dimensional flow produced by alternately rotating a spherical tumbler about two perpendicular axes are studied over a range of particle sizes and volume ratios using…

Soft Condensed Matter · Physics 2019-07-03 Mengqi Yu , Paul B. Umbanhowar , Julio M. Ottino , Richard M. Lueptow

We rewrite simplicially the standard definitions of a complete first order theory, a model of it, and various characterisations of stability of a complete first order theory. In our reformulations the simplicial language replaces the…

Category Theory · Mathematics 2025-10-02 Misha Gavrilovich

We reveal the critical properties of the phase transition towards superfluid order that has been proposed to occur in large spin fermionic systems. For this purpose, we consider the bosonic field theory for fluctuations of the complex…

Statistical Mechanics · Physics 2023-05-03 Michal Hnatič , Georgii Kalagov

Using Monte Carlo simulations, we study thermal and critical properties of two systems, in which domain walls and so-called $Z_2$-vortices as topological defects are presented. The main model is a lattice version of the $O(3)$ principal…

Other Condensed Matter · Physics 2017-03-16 A. O. Sorokin

Cell fate decisions in multicellular organisms are precisely coordinated, leading to highly reproducible macroscopic outcomes of developmental processes. The origins of this reproducibility can be found at the molecular level during the…

Molecular Networks · Quantitative Biology 2013-09-25 Mariela D. Petkova , Feng Liu , Thomas Gregor

Pattern dynamics on curved surfaces are found everywhere in nature. The geometry of surfaces have been shown to influence dynamics and play a functional role, yet a comprehensive understanding is still elusive. Here, we report for the first…

Pattern Formation and Solitons · Physics 2022-06-15 Ryosuke Nishide , Shuji Ishihara

Many bacteria use rotating helical flagellar filaments to swim. The filaments undergo polymorphic transformations in which the helical pitch and radius change abruptly. These transformations arise in response to mechanical loading, changes…

Soft Condensed Matter · Physics 2010-05-26 Srikanth V. Srigiriraju , Thomas R. Powers

Diffusion-driven patterns appear on curved surfaces in many settings, initiated by unstable modes of an underlying Laplacian operator. On a flat surface or perfect sphere, the patterns are degenerate, reflecting translational/rotational…

Soft Condensed Matter · Physics 2025-09-09 John R. Frank , Jemal Guven , Mehran Kardar , Leyna Shackleton

It is proposed that the spatial (and temporal) patterns spontaneously appearing in dissipative systems maximize the energy flow through the pattern forming interface. In other words - the patterns maximize the entropy growth rate in an…

Adaptation and Self-Organizing Systems · Physics 2007-05-23 Kestutis Staliunas

In a previous paper, we examined a class of possible conformations for helically patterned filaments in contact with a bonding surface. In particular, we investigated geometries where contact between the pattern and the surface was improved…

Subcellular Processes · Quantitative Biology 2016-12-12 Nash Rochman , Sean X. Sun

When the surface of a nominally flat binary material is bombarded with a broad, normally-incident ion beam, disordered hexagonal arrays of nanodots can form. Shipman and Bradley have derived equations of motion that govern the coupled…

Mesoscale and Nanoscale Physics · Physics 2016-01-20 Daniel A. Pearson , R. Mark Bradley , Francis C. Motta , Patrick D. Shipman

We examine the symmetry-breaking effect of fixed constellations of particles on the surface-directed spinodal decomposition of binary blends in the presence of particles whose surfaces have a preferential affinity for one of the components.…

Chemical Physics · Physics 2020-06-16 Supriyo Ghosh , Arnab Mukherjee , Raymundo Arroyave , Jack F. Douglas

Shape-morphing networks of mesoscale filaments are a common hierarchical feature in biology and hold significant potential for a range of technological applications, from micro-muscles to shape-morphing optical devices. Here, we demonstrate…

Twisted and rope-like assemblies of filamentous molecules are common and vital structural elements in cells and tissue of living organisms. We study the intrinsic frustration occurring in these materials between the two-dimensional…

Soft Condensed Matter · Physics 2015-06-03 Amir Azadi , Gregory M. Grason

A phase-separation front will leave in its wake a phase-separated morphology that differs markedly from homogeneous phase-separation morphologies. For a purely diffusive system such a front, moving with constant velocity, will generate very…

Soft Condensed Matter · Physics 2013-05-30 E. M. Foard , A. J. Wagner

By applying effective medium-style calculations to random spring networks, we demonstrate that internal stresses fundamentally alter the nature of the rigidity transition in disordered materials, changing it from continuous to first-order…

Materials Science · Physics 2009-11-11 D. A. Head

The conceptual landscape of convection has two simple gateways: optimal function and random form. Optimal convection adjusts toward a univariate ideal called neutrality. Convection form involves elements (parcels, bubbles, drafts) whose…

Adaptation and Self-Organizing Systems · Physics 2025-04-02 Brian E. Mapes
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