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In many growth processes particles are highly mobile in an active layer at the surface, but are relatively immobile once incorporated in the bulk. We study models in which atoms are allowed to interact, equilibrate, and order on the…

Soft Condensed Matter · Physics 2009-10-31 Mehran Kardar

Conformational transitions are ubiquitous in biomolecular systems, have significant functional roles and are subject to evolutionary pressures. Here we provide a first theoretical framework for topological transition, i.e. conformational…

Disordered Systems and Neural Networks · Physics 2015-09-02 Alireza Mashaghi , Abolfazl Ramezanpour

Thin rigid sheets floating on a liquid substrate appear, for example, in coatings and surfactant monolayers. Upon uniaxial compression the sheet undergoes transitions from a compressed flat state to a periodic wrinkled pattern to a…

Soft Condensed Matter · Physics 2017-10-11 Oz Oshri , Haim Diamant

This paper proves a deformation circle pattern theorem, which gives a complete description of those circle patterns with interstices in terms of the combinatorial type, the exterior intersections angles and the conformal structures of…

Geometric Topology · Mathematics 2018-05-23 Ze Zhou

Network topologies can be non-trivial, due to the complex underlying behaviors that form them. While past research has shown that some processes on networks may be characterized by low-order statistics describing nodes and their neighbors,…

Physics and Society · Physics 2019-10-22 Xin-Zeng Wu , Allon G. Percus , Keith Burghardt , Kristina Lerman

We investigate active particles that exhibit long-range interactions only restricted by a field of view, which is characterized by an angle $\beta$. We show that constraining attractive interactions to a field of view leads to the emergence…

Biological Physics · Physics 2026-04-03 Edgardo Brigatti , Fernando Peruani

An important component in studying mathematical models in many biochemical systems, such as those found in developmental biology, is phase transition. The purpose of this work is to analyze the phase transition property of a…

Analysis of PDEs · Mathematics 2013-12-19 Masoud Yari

The patterns observed on the body surface of living organisms have traditionally been attributed solely to ecological strategies. However, this study investigates a fascinating phenomenon in Pelodiscus sinensis, where patterns formed on the…

Biological Physics · Physics 2024-04-30 Shin Nishihara , Toru Ohira

The spontaneous emergence of ordered structures, known as Turing patterns, in complex networks is a phenomenon that holds potential applications across diverse scientific fields, including biology, chemistry, and physics. Here, we present a…

Physics and Society · Physics 2023-09-26 Jiaying Zhou , Yong Ye , Alex Arenas , Sergio Gómez , Yi Zhao

Topological quantum phase transitions are characterised by changes in global topological invariants. These invariants classify many body systems beyond the conventional paradigm of local order parameters describing spontaneous symmetry…

Strongly Correlated Electrons · Physics 2015-05-12 A. Amaricci , J. C. Budich , M. Capone , B. Trauzettel , G. Sangiovanni

We give the first properties of independent Bernoulli percolation, for oriented graphs on the set of vertices $\Z^d$ that are translation-invariant and may contain loops. We exhibit some examples showing that the critical probability for…

Probability · Mathematics 2021-06-09 Olivier Garet , Régine Marchand

A model for a monolayer of two types of particles spontaneously forming ordered patterns is studied by a mesoscopic theory and by MC simulations. We assume hard-cores of the same size for both components, short-range attraction long-range…

Soft Condensed Matter · Physics 2023-11-10 O. Patsahan , A. Meyra , A. Ciach

In this paper, we study the occurrence of patterns in the cycle structures of permutations.

Combinatorics · Mathematics 2011-02-16 Miles Eli Jones , Jeffrey Remmel

In this work we study the problem of first order perturbations of a general hypersurface, i.e. with arbitrary causal character at each point. We extend the framework by Mars (Class. Quantum Grav. 22 3325 (2005)) where this problem was…

General Relativity and Quantum Cosmology · Physics 2020-01-08 Brien C. Nolan , Borja Reina , Kepa Sousa

We describe pattern formation in ecological systems using a version of the classical Lotka-Volterra model characterized by a spatial scale which controls the predator-prey interaction range. Analytical and simulational results show that…

Populations and Evolution · Quantitative Biology 2016-03-02 E. Brigatti , M. Oliva , M. Núñez-López , R. Oliveros-Ramos , J. Benavides

Reaction-diffusion processes across layered media arise in several scientific domains such as pattern-forming E. coli on agar substrates, epidermal-mesenchymal coupling in development, and symmetry-breaking in cell polarisation. We develop…

Pattern Formation and Solitons · Physics 2020-09-18 Andrew L. Krause , Václav Klika , Jacob Halatek , Paul K. Grant , Thomas E. Woolley , Neil Dalchau , Eamonn A. Gaffney

A permutation $\sigma$ describing the relative orders of the first $n$ iterates of a point $x$ under a self-map $f$ of the interval $I=[0,1]$ is called an \emph{order pattern}. For fixed $f$ and $n$, measuring the points $x\in I$ (according…

Combinatorics · Mathematics 2010-03-30 Aaron Abrams , Eric Babson , Henry Landau , Zeph Landau , James Pommersheim

We investigated the physical mechanism for the pattern transition from square lattice to stripes, which appears in vertically oscillating granular layers. We present a continuum model to show that the transition depends on the competition…

Pattern Formation and Solitons · Physics 2009-11-07 Hwa-Kyun Park

This paper discusses the formalization of proofs "by diagram chasing", a standard technique for proving properties in abelian categories. We discuss how the essence of diagram chases can be captured by a simple many-sorted first-order…

Logic in Computer Science · Computer Science 2023-11-29 Assia Mahboubi , Matthieu Piquerez

We consider non-equilibrium phenomena in a very simple model that displays a zero-temperature first-order phase transition. The quantum Ising model with a four-spin exchange is adopted as a general representative of first-order quantum…

Strongly Correlated Electrons · Physics 2016-03-30 Lorenzo Del Re , Michele Fabrizio , Erio Tosatti
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