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In this work, we briefly introduce and discuss some of the diversity measures used in Ecology. After a succinct description and analysis of the most relevant ones, we single out the Shannon-Weiner index. We justify why it is the most…

Cryptography and Security · Computer Science 2013-10-15 Julio Hernandez-Castro , Jeremy Rossman

Diversity indices have been traditionally used to capture the biodiversity of ecosystems by measuring the effective number of species or groups of species. In contrast to abundance, which is correlated with the amount of data available,…

Digital Libraries · Computer Science 2023-01-04 Rafael C. Carrasco , Gustavo Candela , Manuel Marco-Such

Diversity indices are useful single-number metrics for characterizing a complex distribution of a set of attributes across a population of interest. The utility of these different metrics or sets of metrics depend on the context and…

Populations and Evolution · Quantitative Biology 2020-03-06 Song Xu , Lucas Böttcher , Tom Chou

Biodiversity loss is a critical planetary boundary, yet its connection to computing remains largely unexamined. Prior sustainability efforts in computing have focused on carbon and water, overlooking biodiversity due to the lack of…

Computers and Society · Computer Science 2025-07-01 Tianyao Shi , Ritbik Kumar , Inez Hua , Yi Ding

The unprecedented size of the human population, along with its associated economic activities, have an ever increasing impact on global environments. Across the world, countries are concerned about the growing resource consumption and the…

We introduce two models of multiwinner elections with approval preferences and labelled candidates that take the committee's diversity into account. One model aims to find a committee with maximal diversity given a scoring function (e.g. of…

Computer Science and Game Theory · Computer Science 2026-02-13 Paula Böhm , Robert Bredereck , Till Fluschnik

In this paper entropy based methods are compared and used to measure structural diversity of an ensemble of 21 classifiers. This measure is mostly applied in ecology, whereby species counts are used as a measure of diversity. The measures…

Machine Learning · Computer Science 2008-10-21 L. Masisi , V. Nelwamondo , T. Marwala

Entropy measures of probability distributions are widely used measures in ecology, biology, genetics, and in other fields, to quantify species diversity of a community. Unfortunately, entropy-based diversity indices, or diversity indices…

Populations and Evolution · Quantitative Biology 2014-08-14 Karim T. Abou-Moustafa

Diversity measurement underpins the study of biological systems, but measures used vary across disciplines. Despite their common use and broad utility, no unified framework has emerged for measuring, comparing and partitioning diversity.…

Quantitative Methods · Quantitative Biology 2016-12-09 Richard Reeve , Tom Leinster , Christina A. Cobbold , Jill Thompson , Neil Brummitt , Sonia N. Mitchell , Louise Matthews

Recently, the Shannon entropy, which was introduced originally as a measure of information amount, has been widely used as a useful index of various diversities such as biodiversity and geodiversity. In this work we have evaluated the…

Data Analysis, Statistics and Probability · Physics 2009-05-19 Tetsuo Yabuki , Yumi Matsumura , Yoko Nakatani

Texture can be defined as the change of image intensity that forms repetitive patterns, resulting from physical properties of the object's roughness or differences in a reflection on the surface. Considering that texture forms a complex…

Computer Vision and Pattern Recognition · Computer Science 2021-10-06 Steve Tsham Mpinda Ataky , Alessandro Lameiras Koerich

Quantifying diversity is of central importance for the study of structure, function and evolution of microbial communities. The estimation of microbial diversity has received renewed attention with the advent of large-scale metagenomic…

Populations and Evolution · Quantitative Biology 2013-08-06 Bart Haegeman , Jérôme Hamelin , John Moriarty , Peter Neal , Jonathan Dushoff , Joshua S. Weitz

Phylogenetic diversity is a popular measure for quantifying the biodiversity of a collection $Y$ of species, while phylogenetic diversity indices provide a way to apportion phylogenetic diversity to individual species. Typically, for some…

Populations and Evolution · Quantitative Biology 2023-04-24 Magnus Bordewich , Charles Semple

Biodiversity data are substantially increasing, spurred by technological advances and community (citizen) science initiatives. To integrate data is, likewise, becoming more commonplace. Open science promotes open sharing and data usage.…

Other Quantitative Biology · Quantitative Biology 2024-05-31 Carrie Andrew , Sharif Islam , Claus Weiland , Dag Endresen

Quantification of measurement uncertainty is crucial for robust scientific inference, yet accurate estimates of this uncertainty remain elusive for ecological measures of diversity. Here, we address this longstanding challenge by deriving a…

Populations and Evolution · Quantitative Biology 2024-02-27 Andreas Tiffeau-Mayer

In search and recommendation, diversifying the multi-aspect search results could help with reducing redundancy, and promoting results that might not be shown otherwise. Many previous methods have been proposed for this task. However,…

Information Retrieval · Computer Science 2021-05-24 Jianghong Zhou , Eugene Agichtein , Surya Kallumadi

Biodiversity research requires complete and detailed information to study ecosystem dynamics at different scales. Employing data-driven methods like Machine Learning is getting traction in ecology and more specific biodiversity, offering…

Quantitative Methods · Quantitative Biology 2025-10-27 Stylianos Stasinos , Martino Mensio , Elena Lazovik , Athanasios Trantas

One of the important questions in biological evolution is to know if certain changes along protein coding genes have contributed to the adaptation of species. This problem is known to be biologically complex and computationally very…

Distributed, Parallel, and Cluster Computing · Computer Science 2012-03-15 Sébastien Moretti , Riccardo Murri , Sergio Maffioletti , Arnold Kuzniar , Briséïs Castella , Nicolas Salamin , Marc Robinson-Rechavi , Heinz Stockinger

Phylogenies are commonly used to represent the evolutionary relationships between species, and often these phylogenies are equipped with edge lengths that indicate degrees of evolutionary difference. Given such a phylogeny, a popular…

Populations and Evolution · Quantitative Biology 2025-02-12 Martin Frohn , Kerry Manson

Extensive research shows that more species-rich assemblages are generally more productive and efficient in resource use than comparable assemblages with fewer species. But the question of how diversity simultaneously affects the wide…

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