Related papers: The shape of random tanglegrams
Let P_{n,d,D} denote the graph taken uniformly at random from the set of all labelled planar graphs on {1,2,...,n} with minimum degree at least d(n) and maximum degree at most D(n). We use counting arguments to investigate the probability…
We develop a general theory for estimating the probability that a galaxy cluster of a given shape exists. The theory is based on the observed result that the distribution of galaxies is very close to quasi-equilibrium, in both its linear…
We introduce the zip tree, a form of randomized binary search tree that integrates previous ideas into one practical, performant, and pleasant-to-implement package. A zip tree is a binary search tree in which each node has a numeric rank…
A normal network is uniquely determined by the set of phylogenetic trees that it displays. Given a set $\mathcal{P}$ of rooted binary phylogenetic trees, this paper presents a polynomial-time algorithm that reconstructs the unique binary…
Given an edge-weighted tree $T$ with $n$ leaves, sample the leaves uniformly at random without replacement and let $W_k$, $2 \le k \le n$, be the length of the subtree spanned by the first $k$ leaves. We consider the question, "Can $T$ be…
Bounded infinite graphs are defined on the basis of natural physical requirements. When specialized to trees this definition leads to a natural conjecture that the average connectivity dimension of bounded trees cannot exceed two. We verify…
Trees or rooted trees have been generously studied in the literature. A forest is a set of trees or rooted trees. Here we give recurrence relations between the number of some kind of rooted forest with $k$ roots and that with $k+1$ roots on…
We apply a recent duality theorem for tangles in abstract separation systems to derive tangle-type duality theorems for width-parameters in graphs and matroids. We further derive a duality theorem for the existence of clusters in large data…
Motivated by the bijection between Schnyder labelings of a plane triangulation and partitions of its inner edges into three trees, we look for binary labelings for quadrangulations (whose edges can be partitioned into two trees). Our…
Peca suggested in a recent paper on the arxiv to consider binary butterfly trees and their Horton-Strahler numbers. The trees are obtained by glueing two binary trees together in a special way; the results are again binary trees but with a…
Given two messages - as linear sequences of letters, it is immediate to determine whether one can be transformed into the other by simple substitution cipher of the letters. On the other hand, if the letters are carried as labels on nodes…
In this paper, we study tree--like tableaux and some of their probabilistic properties. Tree--like tableaux are in bijection with other combinatorial structures, including permutation tableaux, and have a connection to the partially…
Tree-like tableaux are combinatorial objects that appear in a combinatorial understanding of the PASEP model from statistical mechanics. In this understanding, the corners of the Southeast border correspond to the locations where a particle…
Phylogenetic networks are a special type of graph which generalize phylogenetic trees and that are used to model non-treelike evolutionary processes such as recombination and hybridization. In this paper, we consider {\em unrooted}…
We find precise asymptotic estimates for the number of planar maps and graphs with a condition on the minimum degree, and properties of random graphs from these classes. In particular we show that the size of the largest tree attached to…
Motivated by the study of random temporal networks, we introduce a class of random trees that we coin \emph{uniform temporal trees}. A uniform temporal tree is obtained by assigning independent uniform $[0,1]$ labels to the edges of a…
A characterization is provided for each natural number except one (1) by means of an ordered pair of elements. The first element is a natural number called the type of the natural number characterized, and the second is a natural number…
In this paper, we study tree--like tableaux, combinatorial objects which exhibit a natural tree structure and are connected to the partially asymmetric simple exclusion process (PASEP). There was a conjecture made on the total number of…
In the projective plane over a finite field of characteristic not equal to 2, we compute the probability that a randomly selected pair of distinct conics $(\mathscr{A},\mathscr{B})$, with $\mathscr{A}$ smooth or singular and $\mathscr{B}$…
Topologically constrained genome-like polymers often double-fold into tree-like configurations, which can be modelled on the level of folded (ring) polymers or on the level of the underlying random trees. For both descriptions, we have…