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We study the spread of susceptible-infected-recovered (SIR) infectious diseases where an individual's infectiousness and probability of recovery depend on his/her "age" of infection. We focus first on early outbreak stages when stochastic…

Populations and Evolution · Quantitative Biology 2009-05-14 Joel Miller , Bahman Davoudi , Rafael Meza , Anja Slim , Babak Pourbohloul

We adopt a maximum-likelihood framework to estimate parameters of a stochastic susceptible-infected-recovered (SIR) model with contact tracing on a rooted random tree. Given the number of detectees per index case, our estimator allows to…

Dynamical Systems · Mathematics 2023-11-23 Augustine Okolie , Johannes Müller , Mirjam Kretzschmar

Models of epidemics over networks have become popular, as they describe the impact of individual behavior on infection spread. However, they come with high computational complexity, which constitutes a problem in case large-scale scenarios…

Systems and Control · Electrical Eng. & Systems 2026-02-10 Davide Zorzenon , Fabio Molinari , Joerg Raisch

We introduce a model for a growing random graph based on simultaneous reproduction of the vertices. The model can be thought of as a generalisation of the reproducing graphs of Southwell and Cannings and Bonato et al to allow for a random…

Probability · Mathematics 2011-04-20 Jonathan Jordan

We investigate the sensitivity of epidemic behavior to a bounded susceptibility constraint -- susceptible nodes are infected by their neighbors via the regular SI/SIS dynamics, but subject to a cap on the infection rate. Such a constraint…

Social and Information Networks · Computer Science 2015-02-19 Subhashini Krishnasamy , Siddhartha Banerjee , Sanjay Shakkottai

We study an individual-based stochastic SIR epidemic model with infection-age dependent infectivity on a large random graph, capturing individual heterogeneity and non-homogeneous connectivity. Each individual is associated with particular…

Probability · Mathematics 2026-02-11 Guodong Pang , Étienne Pardoux , Aurélien Velleret

One of the most effective strategies to mitigate the global spreading of a pandemic (e.g., COVID-19) is to shut down international airports. From a network theory perspective, this is since international airports and flights, essentially…

Physics and Society · Physics 2023-10-24 Jing Ma , Xiangyi Meng , Lidia A. Braunstein

We derive an analytical expression for the critical infection rate r_c of the susceptible-infectious-susceptible (SIS) disease spreading model on random networks. To obtain r_c, we first calculate the probability of reinfection, pi, defined…

Disordered Systems and Neural Networks · Physics 2010-07-16 Roni Parshani , Shai Carmi , Shlomo Havlin

We study the SIR model of epidemics on positively correlated heterogeneous networks with population variability, and explore the dependence of the final outbreak size on the network heterogeneity strength and basic reproduction number $R_0$…

Statistical Mechanics · Physics 2023-06-16 Alexander Leibenzon , Michael Assaf

Most models of epidemic spread, including many designed specifically for COVID-19, implicitly assume mass-action contact patterns and undirected contact networks, meaning that the individuals most likely to spread the disease are also the…

Two factors that are often ignored but could play a crucial role in the progression of an infectious disease are the distributions of inherent susceptibility ($\sigma_{inh}$) and external infectivity ($\iota_{ext}$), in a given population.…

Populations and Evolution · Quantitative Biology 2021-01-01 Saumyak Mukherjee , Sayantan Mondal , Biman Bagchi

The generation interval is the time between the infection time of an infected person and the infection time of his or her infector. Probability density functions for generation intervals have been an important input for epidemic models and…

Quantitative Methods · Quantitative Biology 2023-10-24 Eben Kenah , Marc Lipsitch , James M. Robins

We prove that, for Poisson transmission and recovery processes, the classic Susceptible $\to$ Infected $\to$ Recovered (SIR) epidemic model of Kermack and McKendrick provides, for any given time $t>0$, a strict lower bound on the expected…

Populations and Evolution · Quantitative Biology 2017-02-13 Robert R. Wilkinson , Frank G. Ball , Kieran J. Sharkey

The study of social networks, and in particular the spread of disease on networks, has attracted considerable recent attention in the physics community. In this paper, we show that a large class of standard epidemiological models, the…

Statistical Mechanics · Physics 2009-11-07 M. E. J. Newman

The Susceptible-Infectious-Recovered (SIR) equations and their extensions comprise a commonly utilized set of models for understanding and predicting the course of an epidemic. In practice, it is of substantial interest to estimate the…

Applications · Statistics 2025-05-07 Omar Melikechi , Alexander L. Young , Tao Tang , Trevor Bowman , David Dunson , James Johndrow

In this paper we are concerned with the SIR model with random vertex weights on Erd\H{o}s-R\'{e}nyi graph $G(n,p)$. The Erd\H{o}s-R\'{e}nyi graph $G(n,p)$ is generated from the complete graph $C_n$ with $n$ vertices through independently…

Probability · Mathematics 2017-06-28 Xiaofeng Xue

We study the spread of discrete-time epidemics over arbitrary networks for well-known propagation models, namely SIS (susceptible-infected-susceptible), SIR (susceptible-infected-recovered), SIRS (susceptible-infected-recovered-susceptible)…

Social and Information Networks · Computer Science 2016-10-03 Navid Azizan Ruhi , Hyoung Jun Ahn , Babak Hassibi

Epidemic threshold is one of the most important features of the epidemic dynamics. Through a lot of numerical simulations in classic Susceptible-Infected-Recovered (SIR) and Susceptible-Infected-Susceptible (SIS) models on various types of…

Physics and Society · Physics 2014-10-16 Panpan Shu , Wei Wang , Ming Tang , Younghae Do

We study a well mixed SIR epidemic model with heterogeneous susceptibility and infectivity, allowing for an arbitrary joint distribution of these traits. Using an exact final size formulation and a branching process approximation for early…

Populations and Evolution · Quantitative Biology 2026-01-06 Mohamed El Khalifi

Modeling epidemic dynamics plays an important role in studying how diseases spread, predicting their future course, and designing strategies to control them. In this letter, we introduce a model of SIR (susceptible-infected-removed) type…

Populations and Evolution · Quantitative Biology 2013-12-17 Li Chen , Fakhteh Ghanbarnejad , Weiran Cai , Peter Grassberger