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Understanding the asymptotic behavior of reaction-diffusion (RD) systems is crucial for modeling processes ranging from species coexistence in ecology to biochemical interactions within cells. In this work, we analyze RD systems in which…

Dynamical Systems · Mathematics 2025-02-18 Carlos Barajas , Jean-Jacques Slotine , Domitilla Del Vecchio

Mathematical models describing the spatial spreading and invasion of populations of biological cells are often developed in a continuum modelling framework using reaction-diffusion equations. While continuum models based on linear diffusion…

Cellular Automata and Lattice Gases · Physics 2024-01-23 Matthew J Simpson , Keeley M Murphy , Scott W McCue , Pascal R Buenzli

We investigate a nonlinear parabolic reaction-diffusion equation describing the oxygen concentration in encapsulated pancreatic cells with a general core-shell geometry. This geometry introduces a discontinuous diffusion coefficient as the…

Analysis of PDEs · Mathematics 2025-09-04 T. G. de Jong , G. Prokert , A. E. Sterk

Spreading of bacteria in a highly advective, disordered environment is examined. Predictions of super-diffusive spreading for a simplified reaction-diffusion equation are tested. Concentration profiles display anomalous growth and…

Biological Physics · Physics 2007-05-23 John H. Carpenter , Karin A. Dahmen

Flame propagation through a non-volatile solid-fuel suspension is studied using a simplified, time-dependent numerical model that considers the influence of both diffusional and kinetic rates on the particle combustion process. It is…

We study a system of diffusing point particles in which any triplet of particles reacts and is removed from the system when the relative proximity of the constituent particles satisfies a predefined condition. Proximity-based reaction…

Numerical Analysis · Mathematics 2025-04-07 Taylor Kearney , Ricardo Ruiz-Baier , Mark B. Flegg

The aim of this paper is to further develop mathematical models for bleb formation in cells, including cell-membrane interactions with linker proteins. This leads to nonlinear reaction-diffusion equations on a surface coupled to fluid…

Analysis of PDEs · Mathematics 2019-12-20 Philipp Werner , Martin Burger , Jan-Frederik Pietschmann

We study the existence of almost periodic solutions for semi-linear abstract parabolic evolution equations with impulse action at state-dependent moments. In particular, we present conditions excluding the beating phenomenon in these…

Dynamical Systems · Mathematics 2016-10-07 Robert Hakl , Manuel Pinto , Viktor Tkachenko , Sergei Trofimchuk

The large time behaviour of nonnegative solutions to a quasilinear degenerate diffusion equation with a source term depending solely on the gradient is investigated. After a suitable rescaling of time, convergence to a unique profile is…

Analysis of PDEs · Mathematics 2012-02-29 Philippe Laurencot , Christian Stinner

A reaction-kinetic model for a two-species gas mixture undergoing pair generation and recombination reactions is considered on a flat torus. For dominant scattering with a non-moving constant-temperature background the macroscopic limit to…

Analysis of PDEs · Mathematics 2023-08-07 Gianluca Favre , Marlies Pirner , Christian Schmeiser

Reaction systems are discrete dynamical systems that model biochemical processes in living cells using finite sets of reactants, inhibitors, and products. We investigate the computational complexity of a comprehensive set of problems…

Computational Complexity · Computer Science 2023-10-31 Rocco Ascone , Giulia Bernardini , Luca Manzoni

The question addressed here is the long time evolution of the solutions to a class of one-dimensional reaction-diffusion equations, in which the diffusion is given by an integral operator. The underlying motivation, discussed in the first…

Analysis of PDEs · Mathematics 2024-01-02 Jean-Michel Roquejoffre

This paper is devoted to the study of systems of reaction-cross diffusion equations arising in population dynamics. New results of existence of weak solutions are presented, allowing to treat systems of two equations in which one of the…

Analysis of PDEs · Mathematics 2014-10-28 Laurent Desvillettes , Thomas Lepoutre , Ayman Moussa , Ariane Trescases

The spatially distributed reaction networks are indispensable for the understanding of many important phenomena concerning the development of organisms, coordinated cell behavior, and pattern formation. The purpose of this brief discussion…

Optimization and Control · Mathematics 2013-05-15 Marko Seslija , Jacquelien M. A. Scherpen , Arjan van der Schaft

The formation and proliferation of protein aggregates play a central role in a number of devastating neuro-degenerative diseases. Many experimental studies indicate that the ability of existing aggregates to replicate is a key property in…

Biological Physics · Physics 2020-08-25 Georg Meisl , Alexander J Dear , Thomas CT Michaels , Tuomas PJ Knowles

The composition of cellular metabolism is different across species. Empirical data reveal that bacterial species contain similar numbers of metabolic reactions but that the cross-species popularity of reactions is so heterogenous that some…

Populations and Evolution · Quantitative Biology 2024-01-08 Mi Jin Lee , Deok-Sun Lee

Models of adhesion of extended particles on linear and planar substrates are of interest in interpreting surface deposition in colloid, polymer, and certain biological systems. An introduction is presented to recent theoretical advances in…

Condensed Matter · Physics 2016-11-03 Vladimir Privman

This paper is concerned with analysis of coupled fractional reaction-diffusion equations. It provides analytical comparison for the fractional and regular reaction-diffusion systems. As an example, the reaction-diffusion model with cubic…

Adaptation and Self-Organizing Systems · Physics 2007-05-23 Vasyl Gafiychuk , Bohdan Datsko , Vitaliy Meleshko

We study a one-dimensional parabolic PDE with degenerate diffusion and non-Lipschitz nonlinearity involving the derivative. This evolution equation arises when searching radially symmetric solutions of a chemotaxis model of…

Analysis of PDEs · Mathematics 2014-02-04 Alexandre Montaru

The dynamics of particles interacting by key-lock binding of attached biomolecules are studied theoretically. Experimental realizations of such systems include colloids grafted with complementary single-stranded DNA (ssDNA), and particles…

Soft Condensed Matter · Physics 2009-11-13 Nicholas A. Licata , Alexei V. Tkachenko