Related papers: Building a Balanced k-d Tree in O(kn log n) Time
We describe the Median K-Flats (MKF) algorithm, a simple online method for hybrid linear modeling, i.e., for approximating data by a mixture of flats. This algorithm simultaneously partitions the data into clusters while finding their…
Each gene has its own evolutionary history which can substantially differ from the evolutionary histories of other genes. For example, some individual genes or operons can be affected by specific horizontal gene transfer and recombination…
Given a reference set $R$ of $n$ points and a query set $Q$ of $m$ points in a metric space, this paper studies an important problem of finding $k$-nearest neighbors of every point $q \in Q$ in the set $R$ in a near-linear time. In the…
In collective tree exploration, a team of $k$ mobile agents is tasked to go through all edges of an unknown tree as fast as possible. An edge of the tree is revealed to the team when one agent becomes adjacent to that edge. The agents start…
We present an algorithm that, with high probability, generates a random spanning tree from an edge-weighted undirected graph in $\tilde{O}(n^{4/3}m^{1/2}+n^{2})$ time (The $\tilde{O}(\cdot)$ notation hides $\operatorname{polylog}(n)$…
In the $k$-dispersion problem, we need to select $k$ nodes of a given graph so as to maximize the minimum distance between any two chosen nodes. This can be seen as a generalization of the independent set problem, where the goal is to…
We present an improved wavelet tree construction algorithm and discuss its applications to a number of rank/select problems for integer keys and strings. Given a string of length n over an alphabet of size $\sigma\leq n$, our method builds…
In this paper, we study the parallel query complexity of reconstructing biological and digital phylogenetic trees from simple queries involving their nodes. This is motivated from computational biology, data protection, and computer…
We propose a novel clustering model encompassing two well-known clustering models: k-center clustering and k-median clustering. In the Hybrid k-Clusetring problem, given a set P of points in R^d, an integer k, and a non-negative real r, our…
An algorithm is proposed for constructing directed spanning forests of the minimum weight, in which the maximum possible degree of affinity between the minimum forests is preserved when the number of trees changes. The correctness of the…
Weight-balanced trees are a popular form of self-balancing binary search trees. Their popularity is due to desirable guarantees, for example regarding the required work to balance annotated trees. While usual weight-balanced trees perform…
The sorting problem is one of the most relevant problems in computer science. Within the scope of modern computer science it has been studied for more than 70 years. In spite of these facts, new sorting algorithms have been developed in…
The basic idea of the kd-tree algorithm is to recursively partition a point set P by hyperplanes, and to store the obtained partitioning in a binary tree. Due to its immense popularity, many applications in astronomy have been implemented.…
In the past thirty years, numerous algorithms for building the suffix array of a string have been proposed. In 2021, the notion of suffix array was extended from strings to DFAs, and it was shown that the resulting data structure can be…
We extend the left-to-right Lyndon factorisation of a word to the left Lyndon tree construction of a Lyndon word. It yields an algorithm to sort the prefixes of a Lyndon word according to the infinite ordering defined by Dolce et al.…
Tree path minimum query problem is a fundamental problem while processing trees, and is used widely in minimum spanning tree verification and randomized minimum spanning tree algorithms. In this paper, we study the possibility of building…
We compare the performance of two automated classification algorithms: k-dimensional tree (kd-tree) and support vector machines (SVMs), to separate quasars from stars in the databases of the Sloan Digital Sky Survey (SDSS) and the Two…
The "Subset Sum problem" is a very well-known NP-complete problem. In this work, a top-k variation of the "Subset Sum problem" is considered. This problem has wide application in recommendation systems, where instead of k best objects the k…
In [1], a new construction called red-black hierarchy characterizing Laman graphs and an algorithm for computing it were presented. For a Laman graph G=(V,E) with n vertices it runs in O(n^2) time assuming that a partition of (V,E+e) into…
Tree trace reconstruction aims to learn the binary node labels of a tree, given independent samples of the tree passed through an appropriately defined deletion channel. In recent work, Davies, R\'acz, and Rashtchian used combinatorial…