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Related papers: Bifurcation in cell cycle dynamics regulated by p5…

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Both dynamic and static approaches are proposed and investigated for controlling the optical phase of a p-polarized light wave that is guided through a surface-patterned metallic structure with subwavelength features. For dynamic control,…

Autonomous sustained oscillations are ubiquitous in living and nonliving systems. As open systems, far from thermodynamic equilibrium, they defy entropic laws which mandate convergence to stationarity. We present structural conditions on…

Dynamical Systems · Mathematics 2020-01-07 Bernold Fiedler

In processes such as embryo shaping, wound healing, and malignant cell invasion, epithelial cells transition between dispersed phases, where the cells move independently, and condensed phases, where they aggregate and deform to close gaps,…

Soft Condensed Matter · Physics 2024-09-25 Anshuman Pasupalak , Zeng Wu , Massimo Pica Ciamarra

Organisms are equipped with regulatory systems that display a variety of dynamical behaviours ranging from simple stable steady states, to switching and multistability, to oscillations. Earlier work has shown that oscillations in protein…

Molecular Networks · Quantitative Biology 2009-11-13 Simone Pigolotti , Sandeep Krishna , Mogens H. Jensen

We explore the role of cellular life cycles for viruses and host cells in an infection process. For this purpose, we derive a generalized version of the basic model of virus dynamics (Nowak, M.A., Bangham, C.R.M., 1996. Population dynamics…

Populations and Evolution · Quantitative Biology 2008-04-28 Daniel Campos , Vicenç Méndez , Sergei Fedotov

The process of programmed cell death, namely apoptosis, is a natural mechanism that regulates healthy tissue, multicellular structures, and homeostasis. An improved understanding of apoptosis can significantly enhance our knowledge of…

Cell Behavior · Quantitative Biology 2026-03-12 Daniel A. Vaughan , Anna M. Piccinini , Mischa Zelzer , Etienne Farcot , Bindi S. Brook , Kris Van-der-Zee , Luis Espath

We analyze rate-dependent tipping in a fast/slow system with an equilibrium near the fold of a critical manifiold. We find a Hopf bifurcation as the rate parameter increases in the reduced co-moving system. This implies the growth of a…

Dynamical Systems · Mathematics 2017-04-25 Jonathan Hahn

The time-dependent optical properties of molecular systems are investigated by step-scan Fourier-transform spectroscopy in order to explore the dynamics at phase transitions and molecular orientation in the milli- and microsecond range. The…

Materials Science · Physics 2016-07-20 Tobias Peterseim , Martin Dressel

This paper is devoted to the study of the stability of limit cycles of a nonlinear delay differential equation with a distributed delay. The equation arises from a model of population dynamics describing the evolution of a pluripotent stem…

Analysis of PDEs · Mathematics 2009-04-17 Mostafa Adimy , Fabien Crauste , Andrei Halanay , Mihaela Neamtu , Dumitru Opris

Complex network dynamics have been analyzed with models of systems of coupled switches or systems of coupled oscillators. However, many complex systems are composed of components with diverse dynamics whose interactions drive the system's…

Quantitative Methods · Quantitative Biology 2012-01-09 Matthew R. Francis , Elana J. Fertig

To explain the differentiation of stem cells in terms of dynamical systems theory, models of interacting cells with intracellular protein expression dynamics are analyzed and simulated. Simulations were carried out for all possible protein…

Cell Behavior · Quantitative Biology 2015-06-15 Yusuke Goto , Kunihiko Kaneko

We study the emergence of periodic oscillations through a Hopf bifurcation in a scalar diffusion equation on the half line coupled to a dynamic boundary condition. Our results quantify the effect of delay through the buffering in the…

Analysis of PDEs · Mathematics 2026-04-02 Merlin Pelz , Arnd Scheel

The biological processes that execute complex multiple functions, such as cell cycle, must ensure the order of sequential events and keep the dynamic robustness against various fluctuations. Here, we examine the dynamic mechanism and the…

Molecular Networks · Quantitative Biology 2020-04-22 Yao Zhao , Dedi Wang , Zhiwen Zhang , Ying Lu , Xiaojing Yang , Qi Ouyang , Chao Tang , Fangting Li

We study the bifurcations of a set of nine nonlinear ordinary differential equations that describe the regulation of the cyclin-dependent kinase that triggers DNA synthesis and mitosis in the budding yeast, Saccharomyces cerevisiae. We show…

Molecular Networks · Quantitative Biology 2009-11-10 Dorjsuren Battogtokh , John J. Tyson

We study the phase-ordering kinetics following a quench to a final temperature $T_f$ of the one-dimensional p-state clock model. We show the existence of a critical value $p_c=4$, where the properties of the dynamics change. At $T_f=0$, for…

Statistical Mechanics · Physics 2009-11-11 Natascia Andrenacci , Federico Corberi , Eugenio Lippiello

As a system of integrated homeostasis, life is susceptible to disruptions by visceral inflammation, which can disturb internal environment equilibrium. The role of body-spread subcutaneous fascia (scFascia) in this process is poorly…

Genomics · Quantitative Biology 2025-03-25 Haixiang Huang , Bingbing Shen , Zhenwei Zhang , Jianming Yue , Lu Mei , Qiusheng Chen

A four-node network consisting of a negative loop controlling a positive one is studied. It models some of the features of the p53 gene network. Using piecewise linear dynamics with thresholds, the allowed dynamical classes are fully…

Molecular Networks · Quantitative Biology 2007-05-23 Carlos Aguirre , Joao Martins , R. Vilela Mendes

The mechanical properties of PC12 living cells have been studied at the nanoscale with a Force Feedback Microscope using two experimental approaches. Firstly, the local mechanical impedance of the cell membrane has been mapped…

Ionizing radiation is known to delay the cell cycle progression. In particular after particle exposure significant delays have been observed and it has been shown that the extent of delay affects the expression of damage such as chromosome…

Cell Behavior · Quantitative Biology 2009-08-24 Anna Ochab-Marcinek , Ewa Gudowska-Nowak , Elena Nasonova , Sylvia Ritter

A simple electronic circuit with a voltage controlled current source is investigated. The circuit exhibits rich dynamics upon varying the circuit elements such as L,C and R, and the control factor of the current source. Among several other…

Adaptation and Self-Organizing Systems · Physics 2017-05-22 Debdipta Goswami , Subhankar Ray
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