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Related papers: Energy Transfer in molecular devices

200 papers

Differential energy structure of a micro multi-charged-particle system and the beam internal potential energy is derived with consequent property and ecessary inference. Then by combining the energy differential structure with differential…

Accelerator Physics · Physics 2007-05-23 Ji Luo , Chuang Zhang

The energy efficiency optimization of the power generation system and the energy efficiency optimization of the energy consumption system are unified into the same optimization problem, and a simple method to achieve energy efficiency…

Optimization and Control · Mathematics 2024-04-30 Fulai Yao

Protein activity is a significant characteristic for recombinant proteins which can be used as biocatalysts. High activity of proteins reduces the cost of biocatalysts. A model that can predict protein activity from amino acid sequence is…

Quantitative Methods · Quantitative Biology 2018-07-23 X. Han , X. Wang , K. Zhou

The incredible thermo-mechanical properties of biological materials arise from the microscopic scale due to a complex hierarchical mechanism, regulated by microinstabilities at the molecular level. The description of such complex structures…

Biological Physics · Physics 2022-10-26 Luca Bellino

Protein-DNA interactions are vital for many processes in living cells, especially transcriptional regulation and DNA modification. To further our understanding of these important processes on the microscopic level, it is necessary that…

Biomolecules · Quantitative Biology 2007-05-23 Jason E Donald , William W Chen , Eugene I Shakhnovich

Situations where a spontaneous process of energy or matter transfer is enhanced by an external device are widespread in nature (human sweating system, enzyme catalysis, facilitated diffusion across bio-membranes, industrial heat…

Statistical Mechanics · Physics 2010-07-21 Karen Hovhannisyan , Armen E. Allahverdyan

Cell polarization underlies many cellular processes, such as differentiation, migration, and budding. Many living cells, such as budding yeast and fission yeast, use cytoskeletal structures to actively transport proteins to one location on…

Biological Physics · Physics 2022-06-22 Harmen Wierenga , Pieter Rein ten Wolde

Consider $n$ mobile sensors placed independently at random with the uniform distribution on a barrier represented as the unit line segment $[0,1]$. The sensors have identical sensing radius, say $r$. When a sensor is displaced on the line a…

Data Structures and Algorithms · Computer Science 2016-06-23 Rafał Kapelko , Evangelos Kranakis

A nonlinear chain driven by one end may propagate energy in the forbidden band gap by means of nonlinear modes. For harmonic driving at a given frequency, the process ocurs at a threshold amplitude by sudden large energy flow, that we call…

Pattern Formation and Solitons · Physics 2009-11-07 F. Geniet , J. Leon

In active transport molecular communication (ATMC), information particles are actively transported from a transmitter to a receiver using special proteins. Prior work has demonstrated that ATMC can be an attractive and viable solution for…

Emerging Technologies · Computer Science 2015-10-20 Nariman Farsad , H. Birkan Yilmaz , Chan-Byoung Chae , Andrea Goldsmith

Energy dissipation is an unavoidable phenomenon of physical systems that are directly coupled to an external environmental bath. The ability to engineer the processes responsible for dissipation and coupling is fundamental to manipulate the…

Classical Physics · Physics 2017-06-28 Changyao Chen , Damián H. Zanette , David Czaplewski , Steven Shaw , Daniel López

Cells accomplish diverse functions using the same molecular building blocks, from setting up cytoplasmic flows to generating mechanical forces. In particular, transitions between these non-equilibrium states are triggered by regulating the…

Soft Condensed Matter · Physics 2022-01-03 Bibi Najma , Minu Varghese , Lev Tsidilkovski , Linnea Lemma , Aparna Baskaran , Guillaume Duclos

In recent literature there has been a lot of interest in the phenomena of noise induced transport in the absence of an average bias occurring in spatially periodic systems far from equilibrium. One of the main motivations in this area is to…

Biological Physics · Physics 2007-05-23 Raishma Krishnan , A. M. Jayannavar

Internet of Things (IoT) devices often come with batteries of limited capacity that are not easily replaceable or rechargeable, and that constrain significantly the sensing, computing, and communication tasks that they can perform. The…

Networking and Internet Architecture · Computer Science 2025-03-21 Gianluca Rizzo , Marco Ajmone Marsan , Christian Esposito , Biagio Boi

In many biological systems, the movement of individual agents is commonly characterized as having multiple qualitatively distinct behaviors that arise from various biophysical states. This is true for vesicles in intracellular transport,…

Subcellular Processes · Quantitative Biology 2022-07-25 Maria-Veronica Ciocanel , John Fricks , Peter R. Kramer , Scott A. McKinley

We discuss the problem of proteasomal degradation of proteins. Though proteasomes are important for all aspects of the cellular metabolism, some details of the physical mechanism of the process remain unknown. We introduce a stochastic…

Subcellular Processes · Quantitative Biology 2014-07-30 Denis S. Goldobin , Alexey Zaikin

Directed evolution of proteins has been the most effective method for protein engineering. However, a new paradigm is emerging, fusing the library generation and screening approaches of traditional directed evolution with computation…

Biomolecules · Quantitative Biology 2023-05-29 Kadina E. Johnston , Clara Fannjiang , Bruce J. Wittmann , Brian L. Hie , Kevin K. Yang , Zachary Wu

We study a model for a protein searching for a target, using facilitated diffusion, on a DNA molecule confined in a finite volume. The model includes three distinct pathways for facilitated diffusion: (a) sliding - in which the protein…

Subcellular Processes · Quantitative Biology 2009-01-28 Michael Sheinman , Yariv Kafri

Wireless power transfer (WPT) is an emerging paradigm that will enable using wireless to its full potential in future networks, not only to convey information but also to deliver energy. Such networks will enable trillions of future…

Information Theory · Computer Science 2021-01-14 Bruno Clerckx , Kaibin Huang , Lav R. Varshney , Sennur Ulukus , Mohamed-Slim Alouini

Bio-loggers, electronic devices used to track animal behaviour through various sensors, have become essential in wildlife research. Despite continuous improvements in their capabilities, bio-loggers still face significant limitations in…

Machine Learning · Computer Science 2025-03-14 Wilhelm Kerle-Malcharek , Karsten Klein , Martin Wikelski , Falk Schreiber , Timm A. Wild