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Cytoskeletal motor proteins are involved in major intracellular transport processes which are vital for maintaining appropriate cellular function. The motor exhibits distinct states of motility: active motion along filaments, and…

Biological Physics · Physics 2016-11-29 Anne E. Hafner , Ludger Santen , Heiko Rieger , M. Reza Shaebani

Post-translational modification (PTM) of proteins plays a key role in signal transduction, and hence significant effort has gone toward understanding how PTM networks process information. This involves, on the theory side, analyzing the…

Molecular Networks · Quantitative Biology 2018-04-04 Carsten Conradi , Anne Shiu

Protein conformational transitions, which are essential for function, may be driven either by entropy or enthalpy when molecular systems comprising solute and solvent molecules are the focus. Revealing thermodynamic origin of a given…

Biomolecules · Quantitative Biology 2015-05-04 Kai Wang , Shiyang Long , Zhiming Zhang , Lanru Liu , Qimeng Wang , Pu Tian

The wireless power transfer efficiency to implanted bioelectronic devices is constrained by several frequency-dependent physical mechanisms. Recent works have developed several mathematical formulations to understand these mechanisms and…

Energy efficient information transmission may be relevant to biological sensory signal processing as well as to low power electronic devices. We explore its consequences in two different regimes. In an ``immediate'' regime, we argue that…

Statistical Mechanics · Physics 2007-05-23 Vijay Balasubramanian , Don Kimber , Michael J Berry

Cells control the size and organization of biomolecular condensates formed by liquid-liquid phase separation (LLPS), but multiple mechanisms likely contribute to this control and remain to be fully elucidated. Here we propose a…

Biological Physics · Physics 2026-04-10 Le Qiao , Peter Gispert , Lukas S. Stelzl , Friederike Schmid

Knotted proteins, when forced through the pores, can get stuck if the knots in their backbone tighten under force. Alternatively, the knot can slide off the chain, making translocation possible. We construct a simple energy landscape model…

Statistical Mechanics · Physics 2023-11-08 Karol Capała , Piotr Szymczak

The statistical properties of protein folding within the {\phi}^4 model are investigated. The calculation is performed using statistical mechanics and path integral method. In particular, the evolution of heat capacity in term of…

Biological Physics · Physics 2013-09-03 M. Januar , A. Sulaiman , L. T. Handoko

We propose a protocol for quantum energy teleportation which transports energy in spin chains to distant sites only by local operations and classical communication. By utilizing ground-state entanglement and notion of negative energy…

Quantum Physics · Physics 2009-11-13 Masahiro Hotta

Biological signaling is imagined as a combination of activation and transport. The former is triggered by local molecular interactions and the latter is the result of molecular diffusion. However, other fundamental physical principles of…

Biological Physics · Physics 2016-12-07 Bernhard Fichtl , Matthias F. Schneider

The process of protons transport in molecular water chains is of fundamental interest for many biological systems. Although many features of such systems can be analyzed using large-scale computational modeling, other features are better…

Biological Physics · Physics 2011-08-23 Artem Korzhimanov , Mattias Marklund , Tatiana Shutova , Goran Samuelsson

The study of energy transport properties in heterogeneous materials has attracted scientific interest for more than a century, and it continues to offer fundamental and rich questions. One of the unanswered challenges is to extend Anderson…

Control over molecular scale electrical properties within nano junctions is demonstrated, utilizing site-directed C60 targeting into protein macromolecules as a doping means. The protein molecules, self-assembled in a miniaturized…

Mesoscale and Nanoscale Physics · Physics 2011-12-13 Elad Mentovich , Bogdan Belgorodsky , Michael Gozin , Shachar Richter , Hagai Cohen

A bio-heat transfer model for biological tissues in a micro-scale and periodical settings is investigated . It is assumed that the model is a two-component system consisting of solid particles representing tissue cells and interconnected…

Analysis of PDEs · Mathematics 2014-10-28 Abdelhamid Ainouz

The impact-induced energy transfer and dissipation in granular targets without any confining walls are studied by microgravity experiments. A solid projectile impacts into a granular target at low impact speed ($0.045 \leq v_p \leq…

Soft Condensed Matter · Physics 2018-12-05 Hiroaki Katsuragi , Jürgen Blum

Protein folding and design are major biophysical problems, the solution of which would lead to important applications especially in medicine. Here a novel protein model capable of simultaneously provide quantitative protein design and…

Biological Physics · Physics 2015-06-22 Ivan Coluzza

Information molecules play a crucial role in molecular communication (MC), acting as carriers for information transfer. A common approach to get information molecules in MC involves harvesting them from the environment; however, the…

Information Theory · Computer Science 2025-08-08 Dongliang Jing , Linjuan Li , Zhen Cheng , Lin Lin , Andrew W. Eckford

We theoretically and numerically investigate the transport of active colloids to target regions, delimited by asymmetric energy barriers. We show that it is possible to introduce a generalized effective temperature that is related to the…

Soft Condensed Matter · Physics 2015-06-30 N. Koumakis , C. Maggi , R. Di Leonardo

All living cells transport molecules and ions across membranes, often against concentration gradients. This active transport requires continual energy expenditure and is clearly a nonequilibrium process for which standard equilibrium…

Subcellular Processes · Quantitative Biology 2007-05-23 Robert W. Finkel

We present preliminary experimental data that enable us to suggest that heat transfer in cellular tissue under local strong heating is a more complex phenomenon than a simple heat diffusion. Namely, we demonstrate that under local strong…

Soft Condensed Matter · Physics 2007-05-23 E. V. Davydov , I. A. Lubashevsky , V. A. Milyaev , R. F. Musin