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A mesoscopic colloid model is developed in which a spherical colloid is represented by many interacting sites on its surface. The hydrodynamic interactions with thermal fluctuations are taken accounts in full using Dissipative Particle…

Soft Condensed Matter · Physics 2014-01-16 Jiajia Zhou , Friederike Schmid

We investigate the simple one-dimensional driven model, the totally asymmetric exclusion process, coupled to mutually interactive Langmuir kinetics. This model is motivated by recent studies on clustering of motor proteins on microtubules.…

Biological Physics · Physics 2015-06-23 H. D. Vuijk , R. Rens , M. Vahabi , F. C. MacKintosh , A. Sharma

Understanding the behaviors of ecological systems is challenging given their multi-faceted complexity. To proceed, theoretical models such as Lotka-Volterra dynamics with random interactions have been investigated by the dynamical…

Biological Physics · Physics 2024-11-13 Jong Il Park , Deok-Sun Lee , Sang Hoon Lee , Hye Jin Park

Charge transfer multiplet (CTM) theory is a computationally undemanding and highly mature method for simulating the soft X-ray spectra of first-row transition metal complexes. However, CTM theory has seldom been applied to the simulation of…

Chemical Physics · Physics 2018-03-06 Kaili Zhang , Gregory S. Girolami , Josh Vura-Weis

The dynamics of fermionic many-body systems is investigated in the framework of Boltzmann-Langevin (BL) stochastic one-body approaches. Within the recently introduced BLOB model, we examine the interplay between mean-field effects and…

Nuclear Theory · Physics 2017-11-27 P. Napolitani , M. Colonna

We study a two-level system coupled to two quantized electromagnetic modes within the Jaynes-Cummings framework. While the single-mode model is exactly solvable due to its conserved excitation number, yielding finite-dimensional invariant…

The stochastic motions of a diffusing particle contain information concerning the particle's interactions with binding partners and with its local environment. However, accurate determination of the underlying diffusive properties, beyond…

Biological Physics · Physics 2016-12-21 Peter K. Koo , Simon G. J. Mochrie

Modeling relations between individuals is a classical question in social sciences, ecology, etc. In order to uncover a latent structure in the data, a popular approach consists in clustering individuals according to the observed patterns of…

Methodology · Statistics 2020-02-28 Avner Bar-Hen , Pierre Barbillon , Sophie Donnet

We consider a non reactive multi component gas mixture.We propose a class of models, which can be easily generalized to multiple species. The two species mixture is modelled by a system of kinetic BGK equations featuring two interaction…

Analysis of PDEs · Mathematics 2018-06-26 Christian Klingenberg , Marlies Pirner , Gabriella Puppo

The Hubbard model represents the fundamental model for interacting quantum systems and electronic correlations. Using the two-dimensional half-filled Hubbard model at weak coupling as a testing ground, we perform a comparative study of a…

Mean-field models of glasses that present a random first order transition exhibit highly non-trivial fluctuations. Building on previous studies that focused on the critical scaling regime, we here obtain a fully quantitative framework for…

Disordered Systems and Neural Networks · Physics 2022-08-09 Giampaolo Folena , Giulio Biroli , Patrick Charbonneau , Yi Hu , Francesco Zamponi

The self- and mutual-avoiding walk used in conventional lattice models for polymeric systems requires that all lattice sites, polymer segments, and solvent molecules (unoccupied lattice sites) have the same volume. This incorrectly accounts…

Soft Condensed Matter · Physics 2012-11-22 Pengfei Zhang , Qiang Wang

Self-assembled linear structures like giant cylindrical micelles or discotic molecules in solution stacked in flexible columns are systems reminiscent of polydisperse polymer solutions.These supramolecular polymers have an equilibrium…

Soft Condensed Matter · Physics 2015-06-25 C-C Huang , H. Xu , F. Crevel , J. Wittmer , J. -P. Ryckaert

Complex contagion models that involve contagion along higher-order structures, such as simplicial complexes and hypergraphs, yield new classes of mean-field models. Interestingly, the differential equations arising from many such models…

Physics and Society · Physics 2025-09-24 István Z. Kiss , Christian Bick , Péter L. Simon

We use Monte Carlo simulations to study polymer melts consisting of fully flexible and moderately stiff chains in the bond fluctuation model at a volume fraction $0.5$. In order to reduce the local density fluctuations, we test a…

Soft Condensed Matter · Physics 2015-06-24 Hsiao-Ping Hsu

Discontinuous transitions into absorbing states require an effective mechanism that prevents the stabilization of low density states. They can be found in different systems, such as lattice models or stochastic differential equations (e.g.…

Statistical Mechanics · Physics 2015-08-12 Salete Pianegonda , Carlos E. Fiore

We present a numerical study of the slip link model introduced by Likhtman for describing the dy- namics of dense polymer melts. After reviewing the technical aspects associated with the implemen- tation of the model, we extend previous…

Soft Condensed Matter · Physics 2013-06-11 Diego Delbiondo , Elian Masnada , Samy Merabia , Marc Couty , Jean-Louis Barrat

We study the Langevin dynamics of a heteropolymer by means of a mode-coupling approximation scheme, giving rise to a set of coupled integro-differential equations relating the response and correlation functions. The analysis shows that…

Disordered Systems and Neural Networks · Physics 2007-05-23 Estelle Pitard , Eugene I. Shakhnovich

In this paper we wish to point out the possibility of using a complex scalar field in a constant roll inflationary model, as needed for observational viability. We extend the idea of real field inflaton with constant rate of roll to a…

General Relativity and Quantum Cosmology · Physics 2023-07-04 Ali Mohammadi , Nahid Ahmadi , Mehdi Shokri

We present a new hybrid lattice-Boltzmann and Langevin molecular dynamics scheme for simulating the dynamics of suspensions of spherical colloidal particles. The solvent is modeled on the level of the lattice-Boltzmann method while the…

Soft Condensed Matter · Physics 2007-06-20 Vladimir Lobaskin , Burkhard Duenweg