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We show that multiplexing allows to control noise-induced dynamics of multilayer networks in the regime of stochastic resonance. We illustrate this effect on an example of two- and multi-layer networks of bistable overdamped oscillators. In…

Adaptation and Self-Organizing Systems · Physics 2023-01-04 Vladimir V. Semenov , Anna Zakharova

In this work we study the synchronization of Kuramoto oscillators driven by external forces in complex modular networks. The motivation is the neuronal dynamics that takes place during information processing in the neural cortex. The neuron…

Adaptation and Self-Organizing Systems · Physics 2020-04-02 Carolina Arruda Moreira

The extension of the master stability function (MSF) to analyze stability of generalized synchronization for coupled nearly identical oscillators is discussed. The nearly identical nature of the coupled oscillators comes from some parameter…

Chaotic Dynamics · Physics 2015-06-22 Suman Acharyya , R. E. Amritkar

Homeostasis of protein concentrations in cells is crucial for their proper functioning, and this requires concentrations (at their steady-state levels) to be stable to fluctuations. Since gene expression is regulated by proteins such as…

Biological Physics · Physics 2020-11-10 Yipei Guo , Ariel Amir

The apparent stability of population oscillations in ecological systems is a long-standing puzzle. A generic solution for this problem is suggested here. The stabilizing mechanism involves the combined effect of spatial migration,…

Populations and Evolution · Quantitative Biology 2007-05-23 Refael Abta , Marcelo Schiffer , Avishag Ben-Ishay , Nadav M. Shnerb

We show the possibility of controlling the dynamical behavior of a single fiber ring (SFR) resonator system with the fiber being an amplified (gain) channel and the ring being attenuated (loss) nonlinear dielectric medium. Our model is…

Chaotic Dynamics · Physics 2017-10-25 Jyoti P. Deka , Samit Kumar Gupta , Amarendra K. Sarma

The suprachiasmatic nucleus (SCN), also known as the circadian master clock, consists of a large population of oscillator neurons. Together, these neurons produce a coherent signal that drives the body's circadian rhythms. What properties…

Neurons and Cognition · Quantitative Biology 2023-01-04 Stéphanie M. C. Abo , José A. Carrillo , Anita T. Layton

We study the response of an ensemble of synchronized phase oscillators to an external harmonic perturbation applied to one of the oscillators. Our main goal is to relate the propagation of the perturbation signal to the structure of the…

Statistical Mechanics · Physics 2009-11-10 D. H. Zanette

Recently, microRNAs (miRNAs) have emerged as central posttranscriptional regulators of gene expression. miRNAs regulate many key biological processes, including cell growth, death, development and differentiation. This discovery is…

Molecular Networks · Quantitative Biology 2007-12-24 Edwin Wang

Brain functions require both segregated processing of information in specialized circuits, as well as integration across circuits to perform high-level information processing. One possible way to implement these seemingly opposing demands…

A model for synchronization of globally coupled phase oscillators including ``inertial'' effects is analyzed. In such a model, both oscillator frequencies and phases evolve in time. Stationary solutions include incoherent (unsynchronized)…

Condensed Matter · Physics 2009-10-31 J. A. Acebron , L. L. Bonilla , R. Spigler

We investigate how correlations between the diversity of the connectivity of networks and the dynamics at their nodes affect the macroscopic behavior. In particular, we study the synchronization transition of coupled stochastic phase…

Disordered Systems and Neural Networks · Physics 2013-01-22 Bernard Sonnenschein , Francesc Sagués , Lutz Schimansky-Geier

Autonomous circadian clocks drive daily rhythms in physiology and behaviour. A network of coupled neurons, the suprachiasmatic nucleus (SCN), serves as a robust self-sustained circadian pacemaker. Synchronization of this timer to the…

Adaptation and Self-Organizing Systems · Physics 2015-05-28 G. Bordyugov , A. E. Granada , H. Herzel

Many cellular functions are based on the rhythmic organization of biological processes into self-repeating cascades of events. Some of these periodic processes, such as the cell cycles of several species, exhibit conspicuous irregularities…

Molecular Networks · Quantitative Biology 2011-09-30 Pau Rué , Gürol M. Süel , Jordi Garcia-Ojalvo

MicroRNAs are endogenous non-coding RNAs which negatively regulate the expression of protein-coding genes in plants and animals. They are known to play an important role in several biological processes and, together with transcription…

Molecular Networks · Quantitative Biology 2015-03-13 Matteo Osella , Carla Bosia , Davide Cora' , Michele Caselle

In systems of coupled oscillators, the effects of complex signaling can be captured by time delays and phase shifts. Here, we show how time delays and phase shifts lead to different oscillator dynamics and how synchronization rates can be…

Adaptation and Self-Organizing Systems · Physics 2018-03-30 David J. Jörg , Luis G. Morelli , Saúl Ares , Frank Jülicher

Synchronization is an important behavior that characterizes many natural and human made systems composed by several interacting units. It can be found in a broad spectrum of applications, ranging from neuroscience to power-grids, to mention…

Adaptation and Self-Organizing Systems · Physics 2025-10-22 Riccardo Muolo , Timoteo Carletti , James P. Gleeson , Malbor Asllani

The synchronization of power generators is an important condition for the proper functioning of a power system, in which the fluctuations in frequency and the phase angle differences between the generators are sufficiently small when…

Systems and Control · Electrical Eng. & Systems 2023-08-21 Zhen Wang , Kaihua Xi , Aijie Cheng , Hai Xiang Lin , André C. M. Ran , Jan H. van Schuppen , Chenghui Zhang

A system of two enzymes mechanically coupled to each other in a viscous medium was recently studied, and conditions for obtaining synchronization and an enhanced average rate of the thermally-activated catalytic reactions of the enzymes…

Statistical Mechanics · Physics 2023-09-29 Michalis Chatzittofi , Ramin Golestanian , Jaime Agudo-Canalejo

Synchronous oscillations in neuronal ensembles have been proposed to provide a neural basis for the information processes in the brain. In this work, we present a neuromorphic computing algorithm based on oscillator synchronization in a…

Neural and Evolutionary Computing · Computer Science 2019-05-01 Jaesung Choi , Pilwon Kim