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We consider the self-assembly of fractals in one of the most well-studied models of tile based self-assembling systems known as the Two-handed Tile Assembly Model (2HAM). In particular, we focus our attention on a class of fractals called…

Emerging Technologies · Computer Science 2018-10-12 Jacob Hendricks , Joseph Opseth

In this paper, we prove that in the abstract Tile Assembly Model (aTAM), an accretion-based model which only allows for a single tile to attach to a growing assembly at each step, there are no tile assembly systems capable of…

Emerging Technologies · Computer Science 2018-07-18 Jacob Hendricks , Joseph Opseth , Matthew Patitz , Scott Summers

In this paper, we present high-level overviews of tile-based self-assembling systems capable of producing complex, infinite, aperiodic structures known as discrete self-similar fractals. Fractals have a variety of interesting mathematical…

Emerging Technologies · Computer Science 2016-12-26 Jacob Hendricks , Meagan Olsen , Matthew J. Patitz , Trent A. Rogers , Hadley Thomas

It is well known that the discrete Sierpinski triangle can be defined as the nonzero residues modulo 2 of Pascal's triangle, and that from this definition one can easily construct a tileset with which the discrete Sierpinski triangle…

Other Computer Science · Computer Science 2009-01-22 Steven M. Kautz , James I. Lathrop

We demonstrate existence of a tile assembly system that self-assembles the statistically self-similar Sierpinski Triangle in the Winfree-Rothemund Tile Assembly Model. This appears to be the first paper that considers self-assembly of a…

Computational Complexity · Computer Science 2011-07-21 Aaron Sterling

This paper gives a (polynomial time) algorithm to decide whether a given Discrete Self-Similar Fractal Shape can be assembled in the aTAM model.In the positive case, the construction relies on a Self-Assembling System in the aTAM which…

Discrete Mathematics · Computer Science 2024-06-04 Florent Becker

The Tile Assembly Model is a Turing universal model that Winfree introduced in order to study the nanoscale self-assembly of complex (typically aperiodic) DNA crystals. Winfree exhibited a self-assembly that tiles the first quadrant of the…

Computational Complexity · Computer Science 2015-05-18 Jack H. Lutz , Brad Shutters

Winfree (1998) showed that discrete Sierpinski triangles can self-assemble in the Tile Assembly Model. A striking molecular realization of this self-assembly, using DNA tiles a few nanometers long and verifying the results by atomic-force…

Discrete Mathematics · Computer Science 2009-03-11 James I. Lathrop , Jack H. Lutz , Scott M. Summers

This paper answers a long-standing open question in tile-assembly theory, namely that it is possible to strictly assemble discrete self-similar fractals (DSSFs) in the abstract Tile-Assembly Model (aTAM). We prove this in 2 separate ways,…

Computational Geometry · Computer Science 2024-10-11 Florent Becker , Daniel Hader , Matthew J. Patitz

In this paper, we search for {\it absolute} limitations of the Tile Assembly Model (TAM), along with techniques to work around such limitations. Specifically, we investigate the self-assembly of fractal shapes in the TAM. We prove that no…

Computational Complexity · Computer Science 2008-04-26 Matthew J. Patitz , Scott M. Summers

The well-studied Two-Handed Tile Assembly Model (2HAM) is a model of tile assembly in which pairs of large assemblies can bind, or self-assemble, together. In order to bind, two assemblies must have matching glues that can simultaneously…

Computational Geometry · Computer Science 2014-08-22 Erik D. Demaine , Matthew J. Patitz , Trent A. Rogers , Robert T. Schweller , Scott M. Summers , Damien Woods

In this paper, we extend existing results about simulation and intrinsic universality in a model of tile-based self-assembly. Namely, we work within the 2-Handed Assembly Model (2HAM), which is a model of self-assembly in which assemblies…

Computational Geometry · Computer Science 2015-03-17 Jacob Hendricks , Matthew J. Patitz , Trent A. Rogers

The algorithmic self-assembly of shapes has been considered in several models of self-assembly. For the problem of \emph{shape construction}, we consider an extended version of the Two-Handed Tile Assembly Model (2HAM), which contains…

Computational Geometry · Computer Science 2016-08-18 Austin Luchsinger , Robert Schweller , Tim Wylie

The 2-Handed Assembly Model (2HAM) is a tile-based self-assembly model in which, typically beginning from single tiles, arbitrarily large aggregations of static tiles combine in pairs to form structures. The Signal-passing Tile Assembly…

Emerging Technologies · Computer Science 2013-12-16 Tyler Fochtman , Jacob Hendricks , Jennifer E. Padilla , Matthew J. Patitz , Trent A. Rogers

We present a new approach to the theory of k-forms on self-similar fractals. We work out the details for two examples, the standard Sierpinski gasket and the 3-dimensional Sierpinski gasket, but the method is expected to be effective for…

Classical Analysis and ODEs · Mathematics 2012-06-07 Skye Aaron , Zach Conn , Robert Strichartz , Hui Yu

We give a short, self-contained analytic proof of the existence of self-similar Dirichlet forms on pillow-type carpets, a family of infinitely ramified fractals that includes the Sierpi\'nski carpet.

Dynamical Systems · Mathematics 2026-01-19 Shiping Cao , Hua Qiu , Yizhou Wang

This study proposes a method for producing an infinite number of fractals using aperiodic substitution tilings, exemplified by the Ammann Chair tiling. Higher-order substitutions of aperiodic tilings are utilized in relation to the…

Metric Geometry · Mathematics 2023-05-19 Kah Heng Lee

In the abstract Tile Assembly Model, self-assembling systems consisting of tiles of different colors can form structures on which colored patterns are ``painted.'' We explore the complexity, in terms of the numbers of unique tile types…

Emerging Technologies · Computer Science 2024-03-12 Phillip Drake , Matthew J. Patitz , Scott M. Summers , Tyler Tracy

Algorithmic self-assembly occurs when disorganized components autonomously combine to form structures and, by their design and the dynamics of the system, are forced to follow the execution of algorithms. Motivated by applications in…

Computational Geometry · Computer Science 2023-05-05 Daniel Hader , Matthew J. Patitz

We investigate the role of nondeterminism in Winfree's abstract Tile Assembly Model (aTAM), which was conceived to model artificial molecular self-assembling systems constructed from DNA. Of particular practical importance is to find tile…

Computational Complexity · Computer Science 2010-11-29 Nathaniel Bryans , Ehsan Chiniforooshan , David Doty , Lila Kari , Shinnosuke Seki
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