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Visualization, from simple line plots to complex high-dimensional visual analysis systems, has established itself throughout numerous domains to explore, analyze, and evaluate data. Applying such visualizations in the context of simulation…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-12-05 Jens Koenen , Marvin Petersen , Christoph Garth , Tim Gerrits

PEACH Tree is an easy-to-use, online tool for displaying multiple sequence alignments and phylogenetic trees side-by-side. PEACH Tree is powerful for rapidly tracing evolutionary and transmission histories by filtering invariant sites out…

Quantitative Methods · Quantitative Biology 2021-12-15 Jordan Douglas , David Welch

Healthcare professionals need effective ways to use, understand, and validate AI-driven clinical decision support systems. Existing systems face two key limitations: complex visualizations and a lack of grounding in scientific evidence. We…

Human-Computer Interaction · Computer Science 2025-07-08 Reza Samimi , Aditya Bhattacharya , Lucija Gosak , Gregor Stiglic , Katrien Verbert

The collection of large, complex datasets has become common across a wide variety of domains. Visual analytics tools increasingly play a key role in exploring and answering complex questions about these large datasets. However, many…

Human-Computer Interaction · Computer Science 2020-06-19 David Borland , Wenyuan Wang , Jonathan Zhang , Joshua Shrestha , David Gotz

How to extract useful insights from data is always a challenge, especially if the data is multidimensional. Often, the data can be organized according to certain hierarchical structure that are stemmed either from data collection process or…

Applications · Statistics 2016-04-21 Kun Yang , Wing Hung Wong

High-dimensional single-cell data poses significant challenges in identifying underlying biological patterns due to the complexity and heterogeneity of cellular states. We propose a comprehensive gene-cell dependency visualization via…

Machine Learning · Computer Science 2024-07-25 Shang-Jung Wen , Jia-Ming Chang , Fang Yu

Taxonomic classification in biodiversity research involves organizing biological specimens into structured hierarchies based on evidence, which can come from multiple modalities such as images and genetic information. We investigate whether…

Plant breeding and variety trials are usually conducted in multiple environments sampled from a defined target population of environments in order to characterize the performance of breeding lines or varieties. When the population is large…

Applications · Statistics 2026-05-01 Maryna Prus , Lenka Filová , Hans-Peter Piepho , Waqas Ahmed Malik

The rapid development of tools for acquisition and storage of information has lead to the formation of enormous medical databases. The large quantity of data definitely surpasses the abilities of humans for efficient usage without…

Information Retrieval · Computer Science 2009-04-03 Petar Kormushev

Diversity has been used as an effective criteria to optimise test suites for cost-effective testing. Particularly, diversity-based (alternatively referred to as similarity-based) techniques have the benefit of being generic and applicable…

Software Engineering · Computer Science 2018-07-18 Francisco Gomes de Oliveira Neto , Robert Feldt , Linda Erlenhov , José Benardi de Souza Nunes

Plant phenotyping is the assessment of a plant's traits and plant identification is the process of determining the category such as genus and species. In this paper we present an interpretable neural network trained on the UPWINS spectral…

Machine Learning · Computer Science 2024-07-16 William Basener , Abigail Basener , Michael Luegering

Probabilistic models inform an increasingly broad range of business and policy decisions ultimately made by people. Recent algorithmic, computational, and software framework development progress facilitate the proliferation of Bayesian…

Human-Computer Interaction · Computer Science 2022-01-12 Sebastian Stein , John H. Williamson

With rich annotation information, object detection-based automated plant disease diagnosis systems (e.g., YOLO-based systems) often provide advantages over classification-based systems (e.g., EfficientNet-based), such as the ability to…

Computer Vision and Pattern Recognition · Computer Science 2023-10-31 Quan Huu Cap , Atsushi Fukuda , Satoshi Kagiwada , Hiroyuki Uga , Nobusuke Iwasaki , Hitoshi Iyatomi

Biological networks are a very convenient modelling and visualisation tool to discover knowledge from modern high-throughput genomics and postgenomics data sets. Indeed, biological entities are not isolated, but are components of complex…

Quantitative Methods · Quantitative Biology 2018-05-07 Alex White , Matthieu Vignes

Visualizations are essential tools for disseminating information regarding elections and their outcomes, potentially influencing public perceptions. Personas, delineating distinctive segments within the populace, furnish a valuable…

Human-Computer Interaction · Computer Science 2025-07-30 Swaroop Panda , Arun Kumar Sekar

The explosive growth of complex datasets across various modalities necessitates advanced analytical tools that not only group data effectively but also provide human-understandable insights into the discovered structures. We introduce…

Machine Learning · Computer Science 2025-09-04 Gabor Petnehazi , Bernadett Aradi

Global food security depends on predicting crop responses to climate variability, yet process based crop models remain too computationally expensive for large scale exploration of genotype and environment interactions. Here we develop a…

Computational Engineering, Finance, and Science · Computer Science 2026-05-25 Mojdeh Saadati , Juan Panelo , Gustavo Visentini , Soumik Sarkar , Carlos Messina , Baskar Ganapathysubramanian

Legacy spreadsheets are both, an asset, and an enduring problem concerning spreadsheets in business. To make spreadsheets stay alive and remain correct, comprehension of a given spreadsheet is highly important. Visualization techniques…

Software Engineering · Computer Science 2008-09-19 Karin Hodnigg , Roland T. Mittermeir

Recent advances in Generative AI have transformed how users interact with data analysis through natural language interfaces. However, many systems rely too heavily on LLMs, creating risks of hallucination, opaque reasoning, and reduced user…

Human-Computer Interaction · Computer Science 2025-09-04 Ratanond Koonchanok , Alex Kale , Khairi Reda

High-throughput plant phenotyping, the quantitative measurement of observable plant traits, is critical for modern breeding but remains constrained by a "phenotyping bottleneck," where manual data collection is labor-intensive and prone to…

Computer Vision and Pattern Recognition · Computer Science 2026-05-06 Abderrahmene Boudiaf , Sajd Javed
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