English
Related papers

Related papers: A reaction-diffusion model of cholinergic retinal …

200 papers

High frequency thickness mode ultrasound is an energy-efficient way to atomize high-viscosity fluid at high flow rate into fine aerosol mists of micron-sized droplet distributions. However the complex physics of the atomization process is…

Fluid Dynamics · Physics 2021-08-24 Shuai Zhang , Jeremy Orosco , James Friend

Notch signaling is an evolutionary conserved cell-cell communication pathway. Besides regulating cell-fate decisions at an individual cell level, Notch signaling coordinates the emergent spatiotemporal patterning in a tissue through…

Molecular Networks · Quantitative Biology 2020-05-13 Federico Bocci , Jose Nelson Onuchic , Mohit Kumar Jolly

Here we demonstrate workably accurate estimation of optical excitation threshold for large systems comprising of hundreds of atoms through an anti-causally corrected(ACC) real-time dynamics(RTD) approach implemented in a minimal…

Materials Science · Physics 2023-06-13 Joydev De , Manoar Hossain , Joydeep Bhattacharjee

We consider stochastic dynamics of self-propelled particles with nonlocal normalized alignment interactions subject to phase lag. The role of the lag is to indirectly generate chirality into particle motion. To understand large scale…

Adaptation and Self-Organizing Systems · Physics 2020-08-12 Nikita Kruk , José A. Carrillo , Heinz Koeppl

The study of reaction-diffusion systems on networks is of paramount relevance for the understanding of nonlinear processes in systems where the topology is intrinsically discrete, such as the brain. Until now reaction-diffusion systems have…

Pattern Formation and Solitons · Physics 2025-10-22 Lorenzo Giambagli , Lucille Calmon , Riccardo Muolo , Timoteo Carletti , Ginestra Bianconi

Achiral molecules can be made temporarily chiral by excitation with electric fields, in the sense that an average over molecular orientations displays a net chiral signal [Tikhonov et al., Sci. Adv. 8, eade0311 (2022)]. Here, we go beyond…

In the brain, both neurons and glial cells work in conjunction with each other during information processing. Stimulation of neurons can cause calcium oscillations in astrocytes which in turn can affect neuronal calcium dynamics. The…

Neurons and Cognition · Quantitative Biology 2023-08-16 Bhanu Sharma , Spandan Kumar , Subhendu Ghosh , Vikram Singh

Optical resonators are essential components of lasers and other wavelength-sensitive optical devices. A resonator is characterized by a set of modes, each with a resonant frequency omega and resonance width Delta omega=1/tau, where tau is…

chao-dyn · Physics 2015-06-24 Jens U. Noeckel , A. Douglas Stone

The cochlea's capacity to process a broad range of sound intensities has been linked to nonlinear amplification by critical oscillators. However, while the increasing sensitivity of a critical oscillator upon decreasing the stimulus…

Biological Physics · Physics 2025-12-16 Henri Ver Hulst , Carles Blanch Mercader , Frank Jülicher , Pascal Martin

Precise spatial and temporal manipulation of neural activity in specific genetically defined cell populations is now possible with the advent of optogenetics. The emerging field of optogenetics consists of a set of naturally-occurring and…

Neurons and Cognition · Quantitative Biology 2012-08-15 Shinya Nakamura , Michael V. Baratta , Matthew B. Pomrenze , Samuel D. Dolzani , Donald C. Cooper

Recent experimental observations have supported the hypothesis that the cerebral cortex operates in a dynamical regime near criticality, where the neuronal network exhibits a mixture of ordered and disordered patterns. However, A…

Neurons and Cognition · Quantitative Biology 2023-09-08 Longbin Zeng , Fengjian Feng , Wenlian Lu

Living cells employ excitable reaction-diffusion waves for internal cellular functions, in which curvature-inducing proteins are often involved. However, the role of their mechanochemical coupling is not well understood. Here, we report the…

Soft Condensed Matter · Physics 2022-08-09 Naoki Tamemoto , Hiroshi Noguchi

We present a new experimental facility to investigate the nucleation and growth of liquid droplets and ice particles under controlled conditions and characterize processes relevant to cloud microphysics: the rapid expansion aerosol chamber…

Motivated by recent observations that long-range connections (LRC) play a role in various brain phenomena, we have observed two distinct dynamical transitions in the activity of excitable media where waves propagate both between neighboring…

Disordered Systems and Neural Networks · Physics 2008-04-07 Sitabhra Sinha , Jari Saramaki , Kimmo Kaski

Axon guidance (AG) towards their target during embryogenesis or after injury is an important issue in the development of neuronal networks. During their growth, axons often face complex decisions that are difficult to understand when…

Neurons and Cognition · Quantitative Biology 2015-08-10 Rui Ponte Costa

The prevalence of binary stars at close separations implies that many of these systems will interact or merge during the binary's lifetime. This paper presents hydrodynamic simulations of the scenario of binary coalescence through unstable…

Solar and Stellar Astrophysics · Physics 2019-05-29 Morgan MacLeod , Michelle Vick , Dong Lai , James M. Stone

Traveling waves of neural activity emerge in cortical networks both spontaneously and in response to stimuli. The spatiotemporal structure of waves can indicate the information they encode and the physiological processes that sustain them.…

Neurons and Cognition · Quantitative Biology 2023-12-12 Sage Shaw , Zachary P Kilpatrick

Thalamic relay cells fire action potentials that transmit information from retina to cortex. The amount of information that spike trains encode is usually estimated from the precision of spike timing with respect to the stimulus. Sensory…

Sleep slow waves are known to participate in memory consolidation, yet slow waves occurring under anesthesia present no positive effects on memory. Here, we shed light onto this paradox, based on a combination of extracellular recordings in…

Recurrent neural networks are powerful tools for understanding and modeling computation and representation by populations of neurons. Continuous-variable or "rate" model networks have been analyzed and applied extensively for these…

Neurons and Cognition · Quantitative Biology 2016-01-29 Brian DePasquale , Mark M. Churchland , L. F. Abbott