English

Excitable reaction-diffusion waves of curvature-inducing proteins on deformable membrane tubes

Soft Condensed Matter 2022-08-09 v2 Biological Physics

Abstract

Living cells employ excitable reaction-diffusion waves for internal cellular functions, in which curvature-inducing proteins are often involved. However, the role of their mechanochemical coupling is not well understood. Here, we report the membrane deformation induced by the excitable reaction-diffusion waves of curvature-inducing proteins and the alternation in the waves due to the deformation, using a coarse-grained simulation of tubular membranes with a modified FitzHugh--Nagumo model. Protein-propagating waves deform tubular membranes, and large deformations induce budding and erase waves. The wave speed and shape are determined by a combination of membrane deformation and spatial distribution of the curvature-inducing protein. Waves are also undulated in the azimuthal direction depending on the condition. Rotationally symmetric waves locally deform the tubes into a symmetric shape but maintain a straight shape on average. Our simulation method can be applied to other chemical reaction models and used to investigate various biomembrane phenomena.

Keywords

Cite

@article{arxiv.2203.07013,
  title  = {Excitable reaction-diffusion waves of curvature-inducing proteins on deformable membrane tubes},
  author = {Naoki Tamemoto and Hiroshi Noguchi},
  journal= {arXiv preprint arXiv:2203.07013},
  year   = {2022}
}

Comments

12 pages, 15 figures